RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 B4GALNT1Q00973 533 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 ZFP36L1Q07352 338 aaKnown RBP18.26■□□□□ 0.51
USB1-213ENST00000566292 NIPAL4Q0D2K0 466 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 EIF3IQ13347 325 aaKnown RBP18.26■□□□□ 0.51
USB1-213ENST00000566292 MAP7D3Q8IWC1 876 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 NDUFAF2Q8N183 169 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 KIAA1524Q8TCG1 905 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 ZDHHC1Q8WTX9 485 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 RAPGEF5Q92565 580 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 SCAMP4Q969E2 229 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 AP2M1Q96CW1 435 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 TMEM74Q96NL1 305 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 TDRD1Q9BXT4 1180 aaKnown RBP18.26■□□□□ 0.51
USB1-213ENST00000566292 GSDMCQ9BYG8 508 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 STRADBQ9C0K7 418 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 TAAR2Q9P1P5 351 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 AMACRQ9UHK6 382 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 TTLL3Q9Y4R7 772 aa18.26■□□□□ 0.51
USB1-213ENST00000566292 CAPN8A6NHC0 703 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 IVLP07476 585 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 KRT10P13645 584 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 ZNF30P17039 623 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 CES1P23141 567 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 KDELR1P24390 212 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 MAN1A1P33908 653 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 ADCY8P40145 1251 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 STC1P52823 247 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 CTBSQ01459 385 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 ILF3Q12906 894 aaKnown RBP eCLIP18.25■□□□□ 0.51
USB1-213ENST00000566292 CLN3Q13286 438 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 DOK6Q6PKX4 331 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 ADAMTSL4Q6UY14 1074 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 TRIM74Q86UV6 250 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 LSM14AQ8ND56 463 aaKnown RBP18.25■□□□□ 0.51
USB1-213ENST00000566292 OR8K1Q8NGG5 319 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 PATE1Q8WXA2 126 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 HDAC11Q96DB2 347 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 CCDC97Q96F63 343 aaPredicted RBP18.25■□□□□ 0.51
USB1-213ENST00000566292 SCARF2Q96GP6 870 aaPredicted RBP18.25■□□□□ 0.51
USB1-213ENST00000566292 AGAP2Q99490 1192 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 DTLQ9NZJ0 730 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 PLEKHM1Q9Y4G2 1056 aa18.25■□□□□ 0.51
USB1-213ENST00000566292 SSU72P8A0A1W2PR75 194 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 AGRPO00253 132 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 B4GAT1O43505 415 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 ECEL1O95672 775 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 TPM3P06753 285 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 TMEM253P0C7T8 217 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 SLC5A2P31639 672 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 EPHB1P54762 984 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 VAC14Q08AM6 782 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 MESDQ14696 234 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 FAM182AQ5T1J6 154 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 SLC30A9Q6PML9 568 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 ZNF765Q7L2R6 523 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 ZNF438Q7Z4V0 828 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 NLRP8Q86W28 1048 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 CCDC13Q8IYE1 715 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 SNRNP27Q8WVK2 155 aaKnown RBP18.24■□□□□ 0.51
USB1-213ENST00000566292 RNF157Q96PX1 679 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 CHP1Q99653 195 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 LCMT1Q9UIC8 334 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 TMEM98Q9Y2Y6 226 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 LOXL2Q9Y4K0 774 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 PCDHGA7Q9Y5G6 932 aa18.24■□□□□ 0.51
USB1-213ENST00000566292 CLDN7O95471 211 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 MMP2P08253 660 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 ITIH1P19827 911 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 MX2P20592 715 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 OR1D5P58170 312 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 TRIM14Q14142 442 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 NR1D2Q14995 579 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 ZFYVE27Q5T4F4 411 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 JAMLQ86YT9 394 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 NAGSQ8N159 534 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 PLD5Q8N7P1 536 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 CCNYQ8ND76 341 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 LPCAT1Q8NF37 534 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 SLC35G2Q8TBE7 412 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 COX14Q96I36 57 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 WDR24Q96S15 920 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 LYSMD1Q96S90 227 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 RIOK2Q9BVS4 552 aaKnown RBP18.23■□□□□ 0.51
USB1-213ENST00000566292 SEMA6CQ9H3T2 930 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 DEF6Q9H4E7 631 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 PCDH9Q9HC56 1237 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 PISDQ9UG56 409 aa18.23■□□□□ 0.51
USB1-213ENST00000566292 HELZ2Q9BYK8 2649 aaKnown RBP18.22■□□□□ 0.51
USB1-213ENST00000566292 C3orf70A6NLC5 250 aaPredicted RBP18.22■□□□□ 0.51
USB1-213ENST00000566292 K7ENP7 123 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 ERVH48-1M5A8F1 160 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 KCNK1O00180 336 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 AKR1B10O60218 316 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 JCHAINP01591 159 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 PTMSP20962 102 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 ETV5P41161 510 aa18.22■□□□□ 0.51
USB1-213ENST00000566292 PPIDQ08752 370 aaKnown RBP18.22■□□□□ 0.51
USB1-213ENST00000566292 ZBTB17Q13105 803 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms