RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
SF3B3-206ENST00000565990 SHOC2Q9UQ13 582 aa12.61□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF711Q9Y462 761 aa12.61□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF106Q9H2Y7 1883 aaKnown RBP12.61□□□□□ -0.39
SF3B3-206ENST00000565990 BPTFQ12830 3046 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 A0A1W2PPC4 97 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 MAGEB16A2A368 324 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 GMNCA6NCL1 334 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 TM7SF2O76062 418 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 RHOBTB1O94844 696 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 PIRTP0C851 137 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 C6P13671 934 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 ADRA1DP25100 572 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 CD27P26842 260 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 ATP5DP30049 168 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 SPINT3P49223 89 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 PTPN5P54829 565 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 DPTQ07507 201 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 DHX9Q08211 1270 aaKnown RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 TRADDQ15628 312 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 CERCAMQ5T4B2 595 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 PPP1R21Q6ZMI0 780 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 TRMT10CQ7L0Y3 403 aaKnown RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 LYSMD3Q7Z3D4 306 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 DNAAF3Q8N9W5 541 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 UBLCP1Q8WVY7 318 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 SIGLEC10Q96LC7 697 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 SERPINB12Q96P63 405 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 CCT8L2Q96SF2 557 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 KLF6Q99612 283 aaPredicted RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 WRAP53Q9BUR4 548 aaKnown RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 CDH19Q9H159 772 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 CCDC134Q9H6E4 229 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 XAB2Q9HCS7 855 aaKnown RBP12.6□□□□□ -0.39
SF3B3-206ENST00000565990 RIMKLBQ9ULI2 386 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 DMTF1Q9Y222 760 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 HS3ST3A1Q9Y663 406 aa12.6□□□□□ -0.39
SF3B3-206ENST00000565990 FAM47DPA6NHR8 397 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 SDR42E2A6NKP2 422 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 WNT9AO14904 365 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 AVILO75366 819 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 RECQL5O94762 991 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 CRTAMO95727 393 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 C1SP09871 688 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 ELFN1P0C7U0 828 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 LPOP22079 712 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PTGER3P43115 390 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PMS2P54278 862 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PDE1BQ01064 536 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 SGCGQ13326 291 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 SIM2Q14190 667 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PCID2Q5JVF3 399 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PEAR1Q5VY43 1037 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 DENND2CQ68D51 928 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 ZC3H14Q6PJT7 736 aaKnown RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 C6orf89Q6UWU4 347 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 Q6ZVL8 140 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 ZNF765Q7L2R6 523 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 AGGF1Q8N302 714 aaeCLIP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 DEFB119Q8N690 84 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 BLOC1S5Q8TDH9 187 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 PEX13Q92968 403 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 HINFPQ9BQA5 517 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 KIFC1Q9BW19 673 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 IL22Q9GZX6 179 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
SF3B3-206ENST00000565990 NFKBIL1Q9UBC1 381 aaPredicted RBP12.59□□□□□ -0.39
SF3B3-206ENST00000565990 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.39
SF3B3-206ENST00000565990 C2orf81A6NN90 581 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 PRAMEF26H0Y7S4 382 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 LZTS3O60299 673 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 TEAD1P28347 426 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 MAT2AP31153 395 aaKnown RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 TRIM23P36406 574 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ACVR1Q04771 509 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 IFFO1Q0D2I5 559 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 WSCD2Q2TBF2 565 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 KRT71Q3SY84 523 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 SETMARQ53H47 684 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 FNBP1LQ5T0N5 605 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ZDHHC20Q5W0Z9 365 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 KCTD16Q68DU8 428 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ZDHHC24Q6UX98 284 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 TAOK1Q7L7X3 1001 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 NLRP9Q7RTR0 991 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 GLT6D1Q7Z4J2 308 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 ZCCHC9Q8N567 271 aaKnown RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 SUMF1Q8NBK3 374 aa12.58□□□□□ -0.4
SF3B3-206ENST00000565990 TP53I13Q8NBR0 393 aaPredicted RBP12.58□□□□□ -0.4
SF3B3-206ENST00000565990 TMEM145Q8NBT3 493 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms