RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LRRC45Q96CN5 670 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 HAUS1Q96CS2 278 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 IMP4Q96G21 291 aaKnown RBP16.68■□□□□ 0.26
USB1-211ENST00000565662 HIC2Q96JB3 615 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 GFM1Q96RP9 751 aaKnown RBP16.68■□□□□ 0.26
USB1-211ENST00000565662 LGMNQ99538 433 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 DPYSL5Q9BPU6 564 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 TRABDQ9H4I3 376 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 STN1Q9H668 368 aaKnown RBP16.68■□□□□ 0.26
USB1-211ENST00000565662 MAGEE1Q9HCI5 957 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.68■□□□□ 0.26
USB1-211ENST00000565662 PNMA8BQ9ULN7 279 aaPredicted RBP16.68■□□□□ 0.26
USB1-211ENST00000565662 LHX6Q9UPM6 363 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 RAXQ9Y2V3 346 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 WDFY3Q8IZQ1 3526 aa16.68■□□□□ 0.26
USB1-211ENST00000565662 PKD1L2Q7Z442 2459 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 CCDC187A0A096LP49 1063 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 CCDC66A2RUB6 948 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 A8MX80 341 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 KCNK1O00180 336 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 TAF4O00268 1085 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 NTN3O00634 580 aaPredicted RBP16.67■□□□□ 0.26
USB1-211ENST00000565662 BRINP1O60477 761 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 USP12O75317 370 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 NDUFA10O95299 355 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 MAP3K6O95382 1288 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 PDHA1P08559 390 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 CTPS1P17812 591 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 RBMS1P29558 406 aaKnown RBP16.67■□□□□ 0.26
USB1-211ENST00000565662 ZNF75DP51815 510 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 GABREP78334 506 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 SEMG2Q02383 582 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 CCDC50Q8IVM0 306 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 SCARF2Q96GP6 870 aaPredicted RBP16.67■□□□□ 0.26
USB1-211ENST00000565662 NSMCE3Q96MG7 304 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 OR2M4Q96R27 311 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 ZSCAN5AQ9BUG6 496 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 DPEP2Q9H4A9 486 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 ZFYVE1Q9HBF4 777 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 AKAP7Q9P0M2 348 aaPredicted RBP16.67■□□□□ 0.26
USB1-211ENST00000565662 IMPACTQ9P2X3 320 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 EPN1Q9Y6I3 576 aaPredicted RBP16.67■□□□□ 0.26
USB1-211ENST00000565662 FREM2Q5SZK8 3169 aa16.67■□□□□ 0.26
USB1-211ENST00000565662 TTC24A2A3L6 582 aaPredicted RBP16.66■□□□□ 0.26
USB1-211ENST00000565662 D6RAR5 112 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 CST8O60676 142 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 EPOP01588 193 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 CCKBRP32239 447 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 EIF2S3P41091 472 aaKnown RBP16.66■□□□□ 0.26
USB1-211ENST00000565662 GPR3P46089 330 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 SPINT3P49223 89 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 SKOR1P84550 965 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 PTSQ03393 145 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 CDK18Q07002 472 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 XRCC4Q13426 336 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 PRKD1Q15139 912 aaPredicted RBP16.66■□□□□ 0.26
USB1-211ENST00000565662 BROXQ5VW32 411 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 MFSD7Q6UXD7 560 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 SPOCD1Q6ZMY3 1216 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 TSPAN33Q86UF1 283 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 GALNT13Q8IUC8 556 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 CCDC74AQ96AQ1 378 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 RNF25Q96BH1 459 aaPredicted RBP16.66■□□□□ 0.26
USB1-211ENST00000565662 TMEM168Q9H0V1 697 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 ABCG8Q9H221 673 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 FAM83DQ9H4H8 585 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 HACD3Q9P035 362 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 SIRPGQ9P1W8 387 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 TRHDEQ9UKU6 1024 aa16.66■□□□□ 0.26
USB1-211ENST00000565662 ADAMTS20P59510 1910 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 APOC4-APOC2K7ER74 178 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 STK10O94804 968 aaKnown RBP16.65■□□□□ 0.26
USB1-211ENST00000565662 PRLP01236 227 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 APOC2P02655 101 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 CEACAM5P06731 702 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 CTNNA1P35221 906 aaKnown RBP16.65■□□□□ 0.26
USB1-211ENST00000565662 PTPN7P35236 360 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 GNPDA1P46926 289 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 NIPAL4Q0D2K0 466 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
USB1-211ENST00000565662 ZNF569Q5MCW4 686 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 PERM1Q5SV97 790 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 HENMT1Q5T8I9 393 aaKnown RBP16.65■□□□□ 0.26
USB1-211ENST00000565662 CPNE8Q86YQ8 564 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 CCNJLQ8IV13 435 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 SYCE1Q8N0S2 351 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 COX14Q96I36 57 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 TEKT5Q96M29 485 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 LGR4Q9BXB1 951 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 DPH1Q9BZG8 443 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 GLOD4Q9HC38 313 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 FAM153AQ9UHL3 310 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 SUFUQ9UMX1 484 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 ENTPD2Q9Y5L3 495 aa16.65■□□□□ 0.26
USB1-211ENST00000565662 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
USB1-211ENST00000565662 hCG_1818297A0A087WSY0 165 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 B4DGG1 531 aa16.64■□□□□ 0.25
USB1-211ENST00000565662 PPFIA2O75334 1257 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms