RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 AHCYL2Q96HN2 611 aaKnown RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 ZNF830Q96NB3 372 aaPredicted RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 RNF157Q96PX1 679 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 CCNL2Q96S94 520 aaPredicted RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 AGAP2Q99490 1192 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 CHP1Q99653 195 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 ZNF670Q9BS34 389 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 MLPHQ9BV36 600 aaPredicted RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 ADGRE3Q9BY15 652 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 SEMA6CQ9H3T2 930 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 FAM83DQ9H4H8 585 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 NHEJ1Q9H9Q4 299 aaPredicted RBP6.39□□□□□ -1.39
TCF4-228ENST00000565393 RDH14Q9HBH5 336 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 PCDH9Q9HC56 1237 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 SEPT10Q9P0V9 454 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 DNPEPQ9ULA0 475 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 SLC17A4Q9Y2C5 497 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 PRKAB1Q9Y478 270 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 ACACBO00763 2458 aa6.39□□□□□ -1.39
TCF4-228ENST00000565393 A0A0J9YYE9 177 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 C1orf232A0A0U1RR37 186 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ANKRD66B4E2M5 251 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 D6RAR5 112 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 K7ENP7 123 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ERVH48-1M5A8F1 160 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 APOL1O14791 398 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PPM1DO15297 605 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 NVLO15381 856 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 CPNE6O95741 557 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PRLP01236 227 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TRBC1P01850 177 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PYGLP06737 847 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 IVLP07476 585 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TMEM253P0C7T8 217 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ZFXP17010 805 aaPredicted RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 ZNF30P17039 623 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 CD1CP29017 333 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 HNRNPH3P31942 346 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 CCKBRP32239 447 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 CD86P42081 329 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ARHGAP25P42331 645 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 NOP2P46087 812 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 PDX1P52945 283 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 RPL26P61254 145 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 DYNLT1P63172 113 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ZFP36L1Q07352 338 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 CLN3Q13286 438 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TRIM14Q14142 442 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 LY6DQ14210 128 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TGIF1Q15583 401 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PCSK7Q16549 785 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PYCR3Q53H96 274 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 FAM182AQ5T1J6 154 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 INO80CQ6PI98 192 aaPredicted RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 B4GALNT4Q76KP1 1039 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 CLEC14AQ86T13 490 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TRIM74Q86UV6 250 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 NLRP8Q86W28 1048 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ZFAND4Q86XD8 727 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 RFX6Q8HWS3 928 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 GALNT13Q8IUC8 556 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 NRSN1Q8IZ57 195 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PQLC3Q8N755 202 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ZSCAN1Q8NBB4 408 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ARRDC2Q8TBH0 407 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PATE1Q8WXA2 126 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 SPOCK2Q92563 424 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 AGAP3Q96P47 875 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 OR2M4Q96R27 311 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 MCCC1Q96RQ3 725 aaPredicted RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 SLC38A3Q99624 504 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 ARHGAP9Q9BRR9 750 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 SPATA16Q9BXB7 569 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 FRMD8Q9BZ67 464 aaPredicted RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 CDH19Q9H159 772 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TSPY26PQ9H489 355 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 SPTLC3Q9NUV7 552 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 KCNK4Q9NYG8 393 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 DTLQ9NZJ0 730 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PKD2L2Q9NZM6 624 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 AMACRQ9UHK6 382 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 RPL26L1Q9UNX3 145 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 PCDHGA7Q9Y5G6 932 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 TMEM131Q92545 1883 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 PLXNB3Q9ULL4 1909 aa6.38□□□□□ -1.39
TCF4-228ENST00000565393 CNOT1A5YKK6 2376 aaKnown RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 KMT2BQ9UMN6 2715 aaPredicted RBP6.38□□□□□ -1.39
TCF4-228ENST00000565393 PRAMEF33A0A0G2JMD5 474 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 IGHV5-10-1A0A0J9YXX1 117 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SSU72P8A0A1W2PR75 194 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 CAPN8A6NHC0 703 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 A8MU76 341 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 AKR1B15C9JRZ8 316 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 EFSO43281 561 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 PRAMEF10O60809 474 aa6.37□□□□□ -1.39
TCF4-228ENST00000565393 SLC25A14O95258 325 aaPredicted RBP6.37□□□□□ -1.39
TCF4-228ENST00000565393 KRT1P04264 644 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms