RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 FAM169AQ9Y6X4 670 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 BPTFQ12830 3046 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 A0A0U1RQS6 177 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 FAM159BA6NKW6 160 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 A8MX80 341 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 AXIN1O15169 862 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 STX7O15400 261 aaKnown RBP11.08□□□□□ -0.64
SF3B3-205ENST00000564899 RPP40O75818 363 aaKnown RBP11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ADH1BP00325 375 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 LPOP22079 712 aaPredicted RBP11.08□□□□□ -0.64
SF3B3-205ENST00000564899 VIPR1P32241 457 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 NEK3P51956 506 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 COPAP53621 1224 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 TMPRSS15P98073 1019 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 SEMG2Q02383 582 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ACVR1Q04771 509 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ZNF844Q08AG5 666 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 MGAT5Q09328 741 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 CST6Q15828 149 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 CDKN3Q16667 212 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 KBTBD12Q3ZCT8 623 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 LRRC66Q68CR7 880 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 PDPK2PQ6A1A2 396 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ERAP2Q6P179 960 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 FBXL19Q6PCT2 694 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 CRTC1Q6UUV9 634 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 CYS1Q717R9 158 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ERN2Q76MJ5 926 aaKnown RBP11.08□□□□□ -0.64
SF3B3-205ENST00000564899 TTC7BQ86TV6 843 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 TSPAN33Q86UF1 283 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 KCNMB4Q86W47 210 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 RASSF3Q86WH2 238 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 UNC5BQ8IZJ1 945 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 OR13J1Q8NGT2 312 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 PEX13Q92968 403 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ZBTB9Q96C00 473 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ARRDC1-AS1Q9H2J1 176 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ZFYVE1Q9HBF4 777 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 PCDH12Q9NPG4 1184 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 MOCS1Q9NZB8 636 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 IL1RAPL1Q9NZN1 696 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 MMP17Q9ULZ9 603 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 ATG2BQ96BY7 2078 aa11.08□□□□□ -0.64
SF3B3-205ENST00000564899 SMIM23A6NLE4 172 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PLK4O00444 970 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 CCL22O00626 93 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 MID1O15344 667 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PIAS1O75925 651 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 VAPBO95292 243 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 CLDN7O95471 211 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 C1QAP02745 245 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ADRB3P13945 408 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 C5AR1P21730 350 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 LHCGRP22888 699 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 HMGCLP35914 325 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ARCN1P48444 511 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 SUOXP51687 545 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ARSDP51689 593 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 RPS14P62263 151 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PRAMEP78395 509 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 CNTN1Q12860 1018 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 NAB1Q13506 487 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 THOC5Q13769 683 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ARHGEF7Q14155 803 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PTPRCAPQ14761 206 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 KRT71Q3SY84 523 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 AASDHQ4L235 1098 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 DPPA4Q7L190 304 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 CTAGE3PQ8IX95 158 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 SPEM1Q8N4L4 309 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 OR4K2Q8NGD2 314 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 EPS8L3Q8TE67 593 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 HDAC10Q969S8 669 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 MRRFQ96E11 262 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 TMEM109Q9BVC6 243 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 TMEM121BQ9BXQ6 578 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 HDAC8Q9BY41 377 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ROPN1BQ9BZX4 212 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PPCSQ9HAB8 311 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ROPN1Q9HAT0 212 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 BPIFA1Q9NP55 256 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 SMYD2Q9NRG4 433 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 NLE1Q9NVX2 485 aaPredicted RBP11.07□□□□□ -0.64
SF3B3-205ENST00000564899 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 VPS18Q9P253 973 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 PKP3Q9Y446 797 aa11.07□□□□□ -0.64
SF3B3-205ENST00000564899 TCRBV21S2A2A0A5A6 115 aa11.06□□□□□ -0.64
SF3B3-205ENST00000564899 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
SF3B3-205ENST00000564899 CCDC162PA2VCL2 907 aa11.06□□□□□ -0.64
SF3B3-205ENST00000564899 GOLGA6L10A6NI86 522 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms