RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 RTKNQ9BST9 563 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 SPATA16Q9BXB7 569 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 FNDC3AQ9Y2H6 1198 aaKnown RBP15.93■□□□□ 0.14
RAB40C-208ENST00000564703 SPO11Q9Y5K1 396 aa15.93■□□□□ 0.14
RAB40C-208ENST00000564703 CABIN1Q9Y6J0 2220 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 CCDC188H7C350 402 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 AP3B1O00203 1094 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 AURKAO14965 403 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 PPFIA2O75334 1257 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 ECEL1O95672 775 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 TPH1P17752 444 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 LPOP22079 712 aaPredicted RBP15.92■□□□□ 0.14
RAB40C-208ENST00000564703 TEAD1P28347 426 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SARNPP82979 210 aaKnown RBP15.92■□□□□ 0.14
RAB40C-208ENST00000564703 CDH17Q12864 832 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 GPS1Q13098 491 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SEMA5AQ13591 1074 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 LAMB3Q13751 1172 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 FZD2Q14332 565 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 INAVAQ3KP66 663 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 ALS2CLQ60I27 953 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 TTC27Q6P3X3 843 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 MACC1Q6ZN28 852 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SLC22A18ASQ8N1D0 253 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 GLIS1Q8NBF1 620 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SETD7Q8WTS6 366 aaKnown RBP15.92■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF592Q92610 1267 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 WDR92Q96MX6 357 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SLC13A1Q9BZW2 595 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 SLC32A1Q9H598 525 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 BPIFA1Q9NP55 256 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 MOSPD1Q9UJG1 213 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 PCDHGB2Q9Y5G2 931 aa15.92■□□□□ 0.14
RAB40C-208ENST00000564703 TDRD6O60522 2096 aaKnown RBP15.91■□□□□ 0.14
RAB40C-208ENST00000564703 PCDH15Q96QU1 1955 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 NEMP2A6NFY4 417 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 KIF2AO00139 706 aaPredicted RBP15.91■□□□□ 0.14
RAB40C-208ENST00000564703 PCDHGA12O60330 932 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 RASGRP1O95267 797 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 TNFP01375 233 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 CSF2P04141 144 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 MYCLP1P12525 358 aaPredicted RBP15.91■□□□□ 0.14
RAB40C-208ENST00000564703 CTSEP14091 401 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 JUNDP17535 347 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 VPS41P49754 854 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 KIAA1024LP59773 190 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 IL9RQ01113 521 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 OLIG2Q13516 323 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF542PQ5EBM4 170 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 DENND5AQ6IQ26 1287 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 NYAP1Q6ZVC0 841 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 RD3Q7Z3Z2 195 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 HEATR4Q86WZ0 1026 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 KLHL7Q8IXQ5 586 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 GPR26Q8NDV2 337 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 OR56A4Q8NGH8 313 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 FUBP1Q96AE4 644 aaKnown RBP15.91■□□□□ 0.14
RAB40C-208ENST00000564703 EID2BQ96D98 161 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 HIC2Q96JB3 615 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 ZSCAN5AQ9BUG6 496 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 TEX101Q9BY14 249 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 GPR27Q9NS67 375 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 IL17CQ9P0M4 197 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 KLQ9UEF7 1012 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 WDR87Q6ZQQ6 2873 aa15.91■□□□□ 0.14
RAB40C-208ENST00000564703 ZNF292O60281 2723 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 K7ESM1 405 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 TNFRSF10CO14798 259 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 FLRT2O43155 660 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 BUD23O43709 281 aaKnown RBP15.9■□□□□ 0.14
RAB40C-208ENST00000564703 SUN1O94901 812 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 ASMTLO95671 621 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 BPIP17213 487 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 ADCY8P40145 1251 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 DCDC1P59894 354 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 SRP54P61011 504 aaKnown RBP15.9■□□□□ 0.14
RAB40C-208ENST00000564703 CDK3Q00526 305 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 CDK16Q00536 496 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 BNIP3Q12983 259 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 PUM1Q14671 1186 aaKnown RBP eCLIP15.9■□□□□ 0.14
RAB40C-208ENST00000564703 ADAMTSL4Q6UY14 1074 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 HID1Q8IV36 788 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 TTC30BQ8N4P2 665 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 OR52K1Q8NGK4 314 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 RHBDD1Q8TEB9 315 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 PLEKHG4BQ96PX9 1271 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 LGR4Q9BXB1 951 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 DDX47Q9H0S4 455 aaKnown RBP15.9■□□□□ 0.14
RAB40C-208ENST00000564703 EIF2B3Q9NR50 452 aaKnown RBP15.9■□□□□ 0.14
RAB40C-208ENST00000564703 SPASTQ9UBP0 616 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 ARL5AQ9Y689 179 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 TMEM131Q92545 1883 aa15.9■□□□□ 0.14
RAB40C-208ENST00000564703 ASCC3Q8N3C0 2202 aaKnown RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 INPP4BO15327 924 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 URI1O94763 535 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 SLC25A14O95258 325 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-208ENST00000564703 CD59P13987 128 aa15.89■□□□□ 0.13
RAB40C-208ENST00000564703 NME1P15531 152 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms