RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 RBFAQ8N0V3 343 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 ACTL9Q8TC94 416 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 ALG3Q92685 438 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
CLK3-216ENST00000564468 TADA1Q96BN2 335 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 FCRL5Q96RD9 977 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 LRRC61Q9BV99 259 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 TEX101Q9BY14 249 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 CDH19Q9H159 772 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 ITPR1Q14643 2758 aa13.37□□□□□ -0.27
CLK3-216ENST00000564468 TAF4O00268 1085 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 PMPCBO75439 489 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 CLDN7O95471 211 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 NDST3O95803 873 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 FTCDO95954 541 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 MT-CYBP00156 380 aaPredicted RBP13.36□□□□□ -0.27
CLK3-216ENST00000564468 EPOP01588 193 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 RBP3P10745 1247 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 EIF3EP60228 445 aaKnown RBP13.36□□□□□ -0.27
CLK3-216ENST00000564468 SMAD1Q15797 465 aaKnown RBP13.36□□□□□ -0.27
CLK3-216ENST00000564468 PCSK7Q16549 785 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 DEFB133Q30KQ1 61 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 DARS2Q6PI48 645 aaKnown RBP13.36□□□□□ -0.27
CLK3-216ENST00000564468 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 SPATA22Q8NHS9 363 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 APOLD1Q96LR9 279 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 PPP1R2P1Q96PQ5 205 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 TRIB3Q96RU7 358 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 GRPEL1Q9HAV7 217 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 MOSPD1Q9UJG1 213 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 KLK13Q9UKR3 277 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 UNC13CQ8NB66 2214 aa13.36□□□□□ -0.27
CLK3-216ENST00000564468 SCN8AQ9UQD0 1980 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 GOLGA6L3A6NEY3 463 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 TMEM202A6NGA9 273 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 DDX3YO15523 660 aaKnown RBP13.35□□□□□ -0.27
CLK3-216ENST00000564468 GCATO75600 419 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 ANXA9O76027 345 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 GP1BAP07359 652 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 NFKB1P19838 968 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 RBL1P28749 1068 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 CD68P34810 354 aaPredicted RBP13.35□□□□□ -0.27
CLK3-216ENST00000564468 SPINT3P49223 89 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 GEMP55040 296 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 CDK3Q00526 305 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 MPP3Q13368 585 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 C1orf61Q13536 156 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 PEX6Q13608 980 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 GALNT3Q14435 633 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 PTPRRQ15256 657 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 DHRS13Q6UX07 377 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 ADAMTSL4Q6UY14 1074 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 KDELC2Q7Z4H8 507 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 LRRC45Q96CN5 670 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 LGR4Q9BXB1 951 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 GPR63Q9BZJ6 419 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 TCEAL2Q9H3H9 227 aaPredicted RBP13.35□□□□□ -0.27
CLK3-216ENST00000564468 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 TRABDQ9H4I3 376 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 HACD3Q9P035 362 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 RSPH14Q9UHP6 348 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 PACSIN2Q9UNF0 486 aaPredicted RBP13.35□□□□□ -0.27
CLK3-216ENST00000564468 CAPN6Q9Y6Q1 641 aa13.35□□□□□ -0.27
CLK3-216ENST00000564468 A0A0U1RQJ8 604 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 LOC285095A0A1B0GVY8 99 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 PRSS38A1L453 326 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 EIF4E1BA6NMX2 242 aaKnown RBP13.34□□□□□ -0.27
CLK3-216ENST00000564468 YY2O15391 372 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 JUPP14923 745 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 WNT3AP56704 352 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 NR0B2Q15466 257 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 CDKN3Q16667 212 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 CCNI2Q6ZMN8 369 aaPredicted RBP13.34□□□□□ -0.27
CLK3-216ENST00000564468 CACTIN-AS1Q8N1I8 211 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 OR1E3Q8WZA6 343 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
CLK3-216ENST00000564468 NAT6Q93015 286 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 SCAMP4Q969E2 229 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 HIC2Q96JB3 615 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 SMIM14Q96QK8 99 aa13.34□□□□□ -0.27
CLK3-216ENST00000564468 BOCQ9BWV1 1114 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms