RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SEMG2Q02383 582 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 PTSQ03393 145 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 MTAPQ13126 283 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 LONRF1Q17RB8 773 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 UBAP2Q5T6F2 1119 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 LIPIQ6XZB0 460 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CAPN12Q6ZSI9 719 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 OR4K2Q8NGD2 314 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 OR13C4Q8NGS5 318 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 HMGB4Q8WW32 186 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CERS2Q96G23 380 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CDKN2AIPNLQ96HQ2 116 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 DNAJC1Q96KC8 554 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 KDM4CQ9H3R0 1056 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 C2orf42Q9NWW7 574 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 USP36Q9P275 1121 aaKnown RBP12.89□□□□□ -0.35
SPG7-209ENST00000564047 BCCIPQ9P287 314 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPG7-209ENST00000564047 SERGEFQ9UGK8 458 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 SLC2A6Q9UGQ3 507 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
SPG7-209ENST00000564047 CACNA1IQ9P0X4 2223 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 A6NNZ2 444 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 NEMP1O14524 444 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 PLRG1O43660 514 aaKnown RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 VAPBO95292 243 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 APBB3O95704 486 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 IGLV3-19P01714 112 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 SLC4A1P02730 911 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ELFN1P0C7U0 828 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 SDHBP21912 280 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 CXCL12P48061 93 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ARCN1P48444 511 aaKnown RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 SPINT3P49223 89 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 LIG3P49916 1009 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 CCR3P51677 355 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ARSDP51689 593 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 PRAMEP78395 509 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 MGAT5Q09328 741 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 PTPRCAPQ14761 206 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 PDPK2PQ6A1A2 396 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ANO7Q6IWH7 933 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 TRMT10BQ6PF06 316 aaKnown RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 PGBD3Q8N328 593 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 FAM76AQ8TAV0 307 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 FBF1Q8TES7 1133 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 HDAC10Q969S8 669 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 TBATAQ96M53 351 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 HHIPQ96QV1 700 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 CDH19Q9H159 772 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 C20orf96Q9NUD7 363 aaPredicted RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 PKD2L2Q9NZM6 624 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 NFKBIL1Q9UBC1 381 aaPredicted RBP12.88□□□□□ -0.35
SPG7-209ENST00000564047 EBF1Q9UH73 591 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 GGT7Q9UJ14 662 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 ANKRD36A6QL64 1941 aa12.88□□□□□ -0.35
SPG7-209ENST00000564047 FAM159BA6NKW6 160 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 C1QAP02745 245 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 BPIP17213 487 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 ARNTP27540 789 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 SPAM1P38567 509 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 TPMTP51580 245 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 ADPRHP54922 357 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 DCDC1P59894 354 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 TMPRSS15P98073 1019 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 CREB5Q02930 508 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 STAT4Q14765 748 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 AFTPHQ6ULP2 937 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 CYP2U1Q7Z449 544 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 HSD11B1LQ7Z5J1 315 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 TECPR1Q7Z6L1 1165 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 KCNMB4Q86W47 210 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 NRSN1Q8IZ57 195 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 OR14C36Q8NHC7 312 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 GABPB2Q8TAK5 448 aaPredicted RBP12.87□□□□□ -0.35
SPG7-209ENST00000564047 UHMK1Q8TAS1 419 aaKnown RBP12.87□□□□□ -0.35
SPG7-209ENST00000564047 DTX3LQ8TDB6 740 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 CDKL2Q92772 493 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 COQ10AQ96MF6 247 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 ZIM3Q96PE6 472 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 PLEKHG4BQ96PX9 1271 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 CYTH2Q99418 400 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 WRAP53Q9BUR4 548 aaKnown RBP12.87□□□□□ -0.35
SPG7-209ENST00000564047 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 PREBQ9HCU5 417 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 BPIFA1Q9NP55 256 aa12.87□□□□□ -0.35
SPG7-209ENST00000564047 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms