RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 CCDC162PA2VCL2 907 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 GOLGA8KD6RF30 607 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 GOLGA8TH3BQL2 631 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 GAPDHSO14556 408 aaPredicted RBP26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 RAD51BO15315 384 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 RPP40O75818 363 aaKnown RBP26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 USP1O94782 785 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 POLBP06746 335 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 PRSS56P0CW18 603 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 ACVR1Q04771 509 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 LAMB3Q13751 1172 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 SKIDA1Q1XH10 827 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 PALM2Q8IXS6 379 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 PNPLA1Q8N8W4 532 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 RIOK2Q9BVS4 552 aaKnown RBP26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 LRRC4CQ9HCJ2 640 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 IL26Q9NPH9 171 aa26.91■■□□□ 1.9
SH3GL3-205ENST00000563901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 K7ESM1 405 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 MAP3K13O43283 966 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 VAPBO95292 243 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 CA5AP35218 305 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 CREB5Q02930 508 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 PEX6Q13608 980 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 STEAP4Q687X5 459 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 TRMT10BQ6PF06 316 aaKnown RBP26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 TMEFF1Q8IYR6 380 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 SNX19Q92543 992 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 NAT9Q9BTE0 207 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 TSPYL1Q9H0U9 437 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 PSMA3P25788 255 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 SPAM1P38567 509 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 XIAPP98170 497 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 SGCGQ13326 291 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 WSCD2Q2TBF2 565 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 RELL1Q8IUW5 271 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 SERBP1Q8NC51 408 aaKnown RBP eCLIP26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 PLA2G15Q8NCC3 412 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 FAM83DQ9H4H8 585 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 FAM96AQ9H5X1 160 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 MBNL1Q9NR56 388 aaKnown RBP26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 RIMKLBQ9ULI2 386 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 CA5BQ9Y2D0 317 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 ZBTB32Q9Y2Y4 487 aaPredicted RBP26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 SLCO1B1Q9Y6L6 691 aa26.9■■□□□ 1.9
SH3GL3-205ENST00000563901 HRO43593 1189 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 ACSL3O95573 720 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 F7P08709 466 aaPredicted RBP26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 MC4RP32245 332 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 PMS2P54278 862 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 SLMAPQ14BN4 828 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 CHRNA6Q15825 494 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 SPANXN3Q5MJ09 141 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 CYP2U1Q7Z449 544 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 SLC41A1Q8IVJ1 513 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 TP53I13Q8NBR0 393 aaPredicted RBP26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 OR6P1Q8NGX9 317 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 NELL1Q92832 810 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 AP2M1Q96CW1 435 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 KLF6Q99612 283 aaPredicted RBP26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 LRFN3Q9BTN0 628 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 FAM169AQ9Y6X4 670 aa26.89■■□□□ 1.9
SH3GL3-205ENST00000563901 GLYATL1P3A0A0U1RQE8 302 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 LATO43561 262 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 GALR2O43603 387 aaPredicted RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 PIAS1O75925 651 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 PRAMEF1O95521 474 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 GOT2P00505 430 aaKnown RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 PCCBP05166 539 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 HADHAP40939 763 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 ARCN1P48444 511 aaKnown RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 CDKN1CP49918 316 aaPredicted RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 PRAMEP78395 509 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 IRF4Q15306 451 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 HENMT1Q5T8I9 393 aaKnown RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 KIAA0930Q6ICG6 404 aaPredicted RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 CEP128Q6ZU80 1094 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 ARMCX6Q7L4S7 300 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 CCNJLQ8IV13 435 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 GAB3Q8WWW8 586 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 SPATA16Q9BXB7 569 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 VPS37BQ9H9H4 285 aa26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 TNRC6BQ9UPQ9 1833 aaKnown RBP26.88■■□□□ 1.89
SH3GL3-205ENST00000563901 UQCRHLA0A096LP55 91 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 FADS2P1A8MWK0 482 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 TTC4O95801 387 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 TUBBP07437 444 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 UQCRHP07919 91 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 CCR5P51681 352 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 SLC36A4Q6YBV0 504 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 C3orf62Q6ZUJ4 267 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 PTAR1Q7Z6K3 402 aaPredicted RBP26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 NRSN1Q8IZ57 195 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 UHMK1Q8TAS1 419 aaKnown RBP26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 PEX13Q92968 403 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 HSPA12BQ96MM6 686 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 PLEKHG4BQ96PX9 1271 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 C1QTNF1Q9BXJ1 281 aa26.87■■□□□ 1.89
SH3GL3-205ENST00000563901 C20orf96Q9NUD7 363 aaPredicted RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms