RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FGF22Q9HCT0 170 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 KCTD5Q9NXV2 234 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SMARCAL1Q9NZC9 954 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 SHOC2Q9UQ13 582 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 ZNF711Q9Y462 761 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBR1-204ENST00000563239 AKAP13Q12802 2813 aa8.52□□□□□ -1.05
UBR1-204ENST00000563239 LRP4O75096 1905 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 RGSL1A5PLK6 1076 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 FADS2P1A8MWK0 482 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 USP12O75317 370 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ZNF189O75820 626 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 ANXA9O76027 345 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 STK10O94804 968 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 DKK1O94907 266 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 CEACAM5P06731 702 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 ZSCAN5DPP0CG00 497 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 TSHRP16473 764 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 JUNDP17535 347 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 HLA-DPA1P20036 260 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 STIP1P31948 543 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 CA5AP35218 305 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 GRK6P43250 576 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 KCNJ1P48048 391 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 HK3P52790 923 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 THOP1P52888 689 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 GEMP55040 296 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 SRP54P61011 504 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 CDK3Q00526 305 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 PDAP1Q13442 181 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 TRIP6Q15654 476 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 LONRF2Q1L5Z9 754 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 P3H1Q32P28 736 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 PROX2Q3B8N5 592 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 HENMT1Q5T8I9 393 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 FAXCQ5TGI0 409 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ENPP7Q6UWV6 458 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ADAMTSL4Q6UY14 1074 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 SLCO6A1Q86UG4 719 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 HEATR4Q86WZ0 1026 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 PHACTR4Q8IZ21 702 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 EID2Q8N6I1 236 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ZNF548Q8NEK5 533 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 PDXPQ96GD0 296 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 SCARF2Q96GP6 870 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 COX14Q96I36 57 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 PBKQ96KB5 322 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 WDR92Q96MX6 357 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 OSBPL9Q96SU4 736 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 FERMT1Q9BQL6 677 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 LRRC61Q9BV99 259 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 FRMD8Q9BZ67 464 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 FAM83DQ9H4H8 585 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 SLC32A1Q9H598 525 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 WDR26Q9H7D7 661 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ZFYVE1Q9HBF4 777 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ARNT2Q9HBZ2 717 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 MRPL40Q9NQ50 206 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 KCND1Q9NSA2 647 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 NFKBIL1Q9UBC1 381 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 TMPRSS11EQ9UL52 423 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 TTC7AQ9ULT0 858 aaPredicted RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 WASF3Q9UPY6 502 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 DRG1Q9Y295 367 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 ZKSCAN5Q9Y2L8 839 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 AAR2Q9Y312 384 aaKnown RBP8.51□□□□□ -1.05
UBR1-204ENST00000563239 DGKBQ9Y6T7 804 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ACACBO00763 2458 aa8.51□□□□□ -1.05
UBR1-204ENST00000563239 ARID1BQ8NFD5 2236 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 COL5A1P20908 1838 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 SCN8AQ9UQD0 1980 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 LY6G6EA0A0G2JKS1 128 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 CACNB4O00305 520 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 GAPDHSO14556 408 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 TNFRSF10CO14798 259 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 SCAMP1O15126 338 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 ZNF185O15231 689 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 AQP9O43315 295 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 SIGLEC6O43699 453 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 KIF5CO60282 957 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 FGF1P05230 155 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 MYCLP1P12525 358 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 BPIP17213 487 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 RPL22P35268 128 aaKnown RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 HMGCLP35914 325 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 POLD2P49005 469 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 DCDC1P59894 354 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 HNRNPKP61978 463 aaKnown RBP eCLIP8.5□□□□□ -1.05
UBR1-204ENST00000563239 SIM1P81133 766 aaPredicted RBP8.5□□□□□ -1.05
UBR1-204ENST00000563239 PPARDQ03181 441 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 C1orf61Q13536 156 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 PRPSAP1Q14558 356 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 PTPRCAPQ14761 206 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 RAET1GQ6H3X3 334 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 CCDC70Q6NSX1 233 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 TTC27Q6P3X3 843 aa8.5□□□□□ -1.05
UBR1-204ENST00000563239 ARHGEF18Q6ZSZ5 1173 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms