RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZCCHC9Q8N567 271 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 POC5Q8NA72 575 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CLEC18CQ8NCF0 446 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SPATA3Q8NHX4 192 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ASB5Q8WWX0 329 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM149B1Q96BN6 582 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SLITRK1Q96PX8 696 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 MAP7D2Q96T17 732 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 BAG1Q99933 345 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SF3B5Q9BWJ5 86 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 HIPK2Q9H2X6 1198 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC28A3Q9HAS3 691 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 MAGEE1Q9HCI5 957 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ASAH2Q9NR71 780 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CYSLTR2Q9NS75 346 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 TMEM51Q9NW97 253 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 HIF1ANQ9NWT6 349 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 TAB2Q9NYJ8 693 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CPSF2Q9P2I0 782 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SUCLA2Q9P2R7 463 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 CFDP1Q9UEE9 299 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 FBXL17Q9UF56 701 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 ZHX1Q9UKY1 873 aaPredicted RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 R3HDM2Q9Y2K5 976 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 AAR2Q9Y312 384 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 LSM4Q9Y4Z0 139 aaKnown RBP3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 SESN1Q9Y6P5 492 aa3.32□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A1B0GVM2 712 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A1B0GVT2 93 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A1W2PRG0 241 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ITM2AO43736 263 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 MTA2O94776 668 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 RGS11O94810 467 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 TPPPO94811 219 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 IPO7O95373 1038 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 MMP2P08253 660 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 HOXC6P09630 235 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SELLP14151 372 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 CD58P19256 250 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SHMT1P34896 483 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC15A1P46059 708 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 KCNJ4P48050 445 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 AMTP48728 403 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 RRP1P56182 461 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SORDQ00796 357 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 CTTNQ14247 550 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PSMD6Q15008 389 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ASTE1Q2TB18 679 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 IGSF11Q5DX21 431 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 C1orf141Q5JVX7 400 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PLEKHA7Q6IQ23 1121 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 NAA16Q6N069 864 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 DENND5BQ6ZUT9 1274 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 VSIG1Q86XK7 387 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 CCDC105Q8IYK2 499 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 AADATQ8N5Z0 425 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PRR26Q8N8Z3 221 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 APPL2Q8NEU8 664 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 BEST2Q8NFU1 509 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ARRDC2Q8TBH0 407 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 TRIB2Q92519 343 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ATP6V1E2Q96A05 226 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC22A18Q96BI1 424 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 GAD1Q99259 594 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PAFAH2Q99487 392 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ALDH8A1Q9H2A2 487 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PLK3Q9H4B4 646 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 RANGRFQ9HD47 186 aaPredicted RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 BPIFA1Q9NP55 256 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 DDX4Q9NQI0 724 aaKnown RBP3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 SETD4Q9NVD3 440 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 DLGAP2Q9P1A6 1054 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 ABI3Q9P2A4 366 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PCDHA7Q9UN72 937 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 INSL5Q9Y5Q6 135 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 PTGDR2Q9Y5Y4 395 aa3.31□□□□□ -1.88
SHCBP1-202ENST00000563219 C1orf226A1L170 272 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 KDM4EB2RXH2 506 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 AFPP02771 609 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 CDH2P19022 906 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 IL11P20809 199 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 CDKN2AP42771 156 aaKnown RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 CAMPP49913 170 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 PRAMEP78395 509 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 NIPAL4Q0D2K0 466 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 OLIG2Q13516 323 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 DRAP1Q14919 205 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 CXorf66Q5JRM2 361 aaPredicted RBP3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 ZNF549Q6P9A3 640 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 QSOX2Q6ZRP7 698 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 MTSS1LQ765P7 747 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 AACSQ86V21 672 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 KBTBD6Q86V97 674 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 CEP97Q8IW35 865 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC35F3Q8IY50 421 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 MIGA1Q8NAN2 632 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 SCCPDHQ8NBX0 429 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 NEXN-AS1Q8NBZ9 246 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 SMRP1Q8NCR6 262 aa3.3□□□□□ -1.88
SHCBP1-202ENST00000563219 AGBL3Q8NEM8 1001 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms