RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 TRPM7Q96QT4 1865 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ATOH8Q96SQ7 321 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 AARSD1Q9BTE6 412 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 TRIM54Q9BYV2 358 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 MID1IP1Q9NPA3 183 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 SDR39U1Q9NRG7 319 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 TMEM45AQ9NWC5 275 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
USB1-207ENST00000563149 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 TDRD15B5MCY1 1934 aaKnown RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 PIP5K1BO14986 540 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 INPPL1O15357 1258 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 GOT2P00505 430 aaKnown RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 UMPSP11172 480 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 MTHFD2P13995 350 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 FGFR3P22607 806 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 HPCAP84074 193 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 TIAL1Q01085 375 aaKnown RBP eCLIP13.06□□□□□ -0.32
USB1-207ENST00000563149 MTA1Q13330 715 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 RPS6KA2Q15349 733 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 CCL14Q16627 93 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 ISLR2Q6UXK2 745 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 SCN4BQ8IWT1 228 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 FIBCD1Q8N539 461 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 OR52K2Q8NGK3 314 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 STAG3L4Q8TBR4 150 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 KIAA1191Q96A73 305 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 CENPNQ96H22 339 aaPredicted RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 POLR1EQ9GZS1 481 aaKnown RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 CD320Q9NPF0 282 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 AGPAT4Q9NRZ5 378 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
USB1-207ENST00000563149 CPA4Q9UI42 421 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 PADI3Q9ULW8 664 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 CRYL1Q9Y2S2 319 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 PLXNA3P51805 1871 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 MYO16Q9Y6X6 1858 aa13.06□□□□□ -0.32
USB1-207ENST00000563149 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 SOCS2O14508 198 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 KERAO60938 352 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 CTSHP09668 335 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 CKMT2P17540 419 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TSPAN8P19075 237 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 CAPN3P20807 821 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 MAPKAPK2P49137 400 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 CDH13P55290 713 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 ESRRGP62508 458 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 SERINC3Q13530 473 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 IHHQ14623 411 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TRIP4Q15650 581 aaPredicted RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 GEN1Q17RS7 908 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TYSND1Q2T9J0 566 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TMTC4Q5T4D3 741 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 BLOC1S3Q6QNY0 202 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 SPRED1Q7Z699 444 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TFAP2DQ7Z6R9 452 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 LDB1Q86U70 411 aaPredicted RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 PIM3Q86V86 326 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 PTRH1Q86Y79 214 aaKnown RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 COLGALT2Q8IYK4 626 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 TRPV3Q8NET8 790 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 OR4L1Q8NH43 312 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 LRRC58Q96CX6 371 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 MYRFLQ96LU7 910 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 ZNF599Q96NL3 588 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 OCEL1Q9H607 264 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 CATSPERZQ9NTU4 200 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 DDX18Q9NVP1 670 aaKnown RBP13.05□□□□□ -0.32
USB1-207ENST00000563149 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 PCDHA9Q9Y5H5 950 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 GMEB1Q9Y692 573 aa13.05□□□□□ -0.32
USB1-207ENST00000563149 OR51F1A6NGY5 319 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SYCE1LA8MT33 242 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 UBXN8O00124 270 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 RAMP2O60895 175 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CNTN5O94779 1100 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 NPPAP01160 153 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC4A1P02730 911 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 PRR35P0CG20 571 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CDK4P11802 303 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 GFAPP14136 432 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 SLC6A2P23975 617 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 TTKP33981 857 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 CLCQ05315 142 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 MERTKQ12866 999 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 LCP2Q13094 533 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 DCTN2Q13561 401 aaKnown RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 POLD3Q15054 466 aaPredicted RBP13.04□□□□□ -0.32
USB1-207ENST00000563149 OR4D1Q15615 310 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
USB1-207ENST00000563149 PFKFB4Q16877 469 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms