RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 CDK3Q00526 305 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 PTP4A2Q12974 167 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 PAPD7Q5XG87 772 aaKnown RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 SLC30A9Q6PML9 568 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 ASB18Q6ZVZ8 466 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 SRLQ86TD4 932 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 NOP9Q86U38 636 aaKnown RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 HEATR4Q86WZ0 1026 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 PYROXD2Q8N2H3 581 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 SFRP1Q8N474 314 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 ESX1Q8N693 406 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 JOSD2Q8TAC2 188 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 CPA5Q8WXQ8 436 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 NCAPGQ9BPX3 1015 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 ATP13A3Q9H7F0 1226 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 PHPT1Q9NRX4 125 aaPredicted RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 TLK1Q9UKI8 766 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 VPS4AQ9UN37 437 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 MAP4K5Q9Y4K4 846 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 PCDHGA6Q9Y5G7 932 aa8.29□□□□□ -1.08
CKLF-208ENST00000563092 MRPS18BQ9Y676 258 aaKnown RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 PRRC2CQ9Y520 2896 aaKnown RBP8.29□□□□□ -1.08
CKLF-208ENST00000563092 A6NCN8 305 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 HTRA2O43464 458 aaPredicted RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 RFPL1O75677 317 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 HEXIM1O94992 359 aaKnown RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 SOD1P00441 154 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 AVPP01185 164 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 CYP1A1P04798 512 aaPredicted RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 POU3F2P20265 443 aaPredicted RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 HTR7P34969 479 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 DCTP40126 519 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 GNPDA1P46926 289 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 NDST2P52849 883 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 EPHA4P54764 986 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 POLR2LP62875 67 aaKnown RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 DPTQ07507 201 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 CNGA3Q16281 694 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 CDO1Q16878 200 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 NRSN1Q8IZ57 195 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 MSANTD4Q8NCY6 345 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 CPT1CQ8TCG5 803 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 EPS8L1Q8TE68 723 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 SLC37A2Q8TED4 501 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 FAM172AQ8WUF8 416 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 NUS1Q96E22 293 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 DTD2Q96FN9 168 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 CTRCQ99895 268 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 SARS2Q9NP81 518 aaKnown RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 B4GALT6Q9UBX8 382 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 RWDD2AQ9UIY3 292 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 NOCTQ9UK39 431 aaKnown RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 PLEKHM1Q9Y4G2 1056 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 RPS6KL1Q9Y6S9 549 aa8.28□□□□□ -1.08
CKLF-208ENST00000563092 MN1Q10571 1320 aaPredicted RBP8.28□□□□□ -1.08
CKLF-208ENST00000563092 SHANK1Q9Y566 2161 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 TCRBV5S1A1TA0A578 114 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 PSMD11O00231 422 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 POLR1CO15160 346 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 FGF10O15520 208 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 TEX33O43247 280 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 CLDN1O95832 211 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 EML2O95834 649 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 MMEP08473 750 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 ZNF28P17035 718 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 LHCGRP22888 699 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 RFC1P35251 1148 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 ACTR1BP42025 376 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 POLD2P49005 469 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 COPB1P53618 953 aaKnown RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 AIF1P55008 147 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 ACTR1AP61163 376 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 AP1S1P61966 158 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 BCL2L1Q07817 233 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 SEMA5AQ13591 1074 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 LAMB3Q13751 1172 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 LRP8Q14114 963 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 RFTN1Q14699 578 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 ACOX1Q15067 660 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 PYCR3Q53H96 274 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 MIIPQ5JXC2 388 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 CFAP58Q5T655 872 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 NAA35Q5VZE5 725 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 C16orf46Q6P387 395 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 MAMDC2Q7Z304 686 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 TECPR1Q7Z6L1 1165 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 TMEM135Q86UB9 458 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 ZNF677Q86XU0 584 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 OR10G6Q8NH81 332 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 PSKH2Q96QS6 385 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 MCCC1Q96RQ3 725 aaPredicted RBP8.27□□□□□ -1.09
CKLF-208ENST00000563092 MOSPD1Q9UJG1 213 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 CROTQ9UKG9 612 aa8.27□□□□□ -1.09
CKLF-208ENST00000563092 FZD10Q9ULW2 581 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms