RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF648Q5T619 568 aaPredicted RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 RNASEH2BQ5TBB1 312 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 ESRP1Q6NXG1 681 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 KYAT3Q6YP21 454 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 Q6ZSR6 202 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 PTAR1Q7Z6K3 402 aaPredicted RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 MPP5Q8N3R9 675 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 NAT8LQ8N9F0 302 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 DENND6BQ8NEG7 585 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 RIOK2Q9BVS4 552 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 GPR63Q9BZJ6 419 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 TRIM31Q9BZY9 425 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 TCEAL2Q9H3H9 227 aaPredicted RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 ARFGAP3Q9NP61 516 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 EIF2B3Q9NR50 452 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 KLF15Q9UIH9 416 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 CNOT6Q9ULM6 557 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 FNDC3AQ9Y2H6 1198 aaKnown RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 PCYT1BQ9Y5K3 369 aaPredicted RBP9.76□□□□□ -0.85
CLK3-208ENST00000562626 HS3ST3A1Q9Y663 406 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 CEP250Q9BV73 2442 aa9.76□□□□□ -0.85
CLK3-208ENST00000562626 ASXL3Q9C0F0 2248 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 COL5A1P20908 1838 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 TMEM202A6NGA9 273 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 ERI2A8K979 691 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 ESPNB1AK53 854 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 E7EVH7 732 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 KIF2AO00139 706 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 TLR4O00206 839 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 CDX4O14627 284 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 DNALI1O14645 258 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 SCAMP1O15126 338 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 VILLO15195 856 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 GAS8O95995 478 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 FUCA1P04066 466 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 ENGP17813 658 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 MGAT1P26572 445 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 HMGCLP35914 325 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 LMAN1P49257 510 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 ARSDP51689 593 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 AFF3P51826 1226 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 SESN2P58004 480 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 NXPH1P58417 271 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 LMNB2Q03252 620 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 EIF2B5Q13144 721 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 FZD2Q14332 565 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 STAT4Q14765 748 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 CSRP2Q16527 193 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 WHAMMP3Q1A5X7 153 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 MSS51Q4VC12 460 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 KHDC1Q4VXA5 237 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 ZNF542PQ5EBM4 170 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 HENMT1Q5T8I9 393 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 IZUMO3Q5VZ72 239 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 CCDC70Q6NSX1 233 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 PNCKQ6P2M8 343 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 PPP1R21Q6ZMI0 780 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 PRR23CQ6ZRP0 262 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 NDUFAF2Q8N183 169 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 OR4K2Q8NGD2 314 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 KIF18AQ8NI77 898 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 NAT14Q8WUY8 206 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 AP2M1Q96CW1 435 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 DNAJC1Q96KC8 554 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 WDR83Q9BRX9 315 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 LRRC1Q9BTT6 524 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 APOOQ9BUR5 198 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 DPH5Q9H2P9 285 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 SUDS3Q9H7L9 328 aaPredicted RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 SYBUQ9NX95 663 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.75□□□□□ -0.85
CLK3-208ENST00000562626 SLC2A6Q9UGQ3 507 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 ASIC3Q9UHC3 531 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 FKBPLQ9UIM3 349 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 SLC6A14Q9UN76 642 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 ANKRD6Q9Y2G4 727 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 SNX24Q9Y343 169 aa9.75□□□□□ -0.85
CLK3-208ENST00000562626 OAS3Q9Y6K5 1087 aaKnown RBP9.75□□□□□ -0.85
CLK3-208ENST00000562626 PTPRZ1P23471 2315 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 GOLGA6CA6NDK9 693 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 GOLGA6BA6NDN3 693 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 MROH6A6NGR9 719 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 OR51F1A6NGY5 319 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 A6NNZ2 444 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 BHMG1C9JSJ3 638 aaPredicted RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 FPGTO14772 594 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 KHNYNO15037 678 aaKnown RBP9.74□□□□□ -0.85
CLK3-208ENST00000562626 INPP4BO15327 924 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 PSMD3O43242 534 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 GOLGA6DP0CG33 693 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 GNSP15586 552 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 HOXD12P35452 270 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 TRIM23P36406 574 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 NUDT1P36639 197 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 ADCY8P40145 1251 aa9.74□□□□□ -0.85
CLK3-208ENST00000562626 MAGEA3P43357 314 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms