RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 C17orf82Q86X59 251 aaPredicted RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 BMPERQ8N8U9 685 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 C3orf20Q8ND61 904 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 DTD2Q96FN9 168 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 SLC38A3Q99624 504 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 TEX101Q9BY14 249 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 ETNK2Q9NVF9 386 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 KCNK6Q9Y257 313 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 SHANK1Q9Y566 2161 aa11.64□□□□□ -0.55
NSMCE1-202ENST00000561960 TCRBV5S1A1TA0A578 114 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 SIGLEC16A6NMB1 481 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 FGF10O15520 208 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 DNAJB5O75953 348 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 STK17BO94768 372 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 HEXIM1O94992 359 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ASMTLO95671 621 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 PSMA2P25787 234 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 GPR1P46091 355 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF235Q14590 738 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 LBRQ14739 615 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 GRM3Q14832 879 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 NR1D2Q14995 579 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 KRT31Q15323 416 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 TSR1Q2NL82 804 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 SMTNL2Q2TAL5 461 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 RFX8Q6ZV50 586 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 NLGN4XQ8N0W4 816 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ARFGAP1Q8N6T3 406 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 CCDC112Q8NEF3 446 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 NLGN4YQ8NFZ3 816 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 OR2M4Q96R27 311 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 DDA1Q9BW61 102 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ABCG8Q9H221 673 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 NOD2Q9HC29 1040 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 LRRC4CQ9HCJ2 640 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNHIT2Q9UHR6 403 aa11.63□□□□□ -0.55
NSMCE1-202ENST00000561960 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 KATNA1O75449 491 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 SOD1P00441 154 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PDGFAP04085 211 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 CALB1P05937 261 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PDHA1P08559 390 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 TCF4P15884 667 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 GNLYP22749 145 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 SEPHS1P49903 392 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 NDST2P52849 883 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 GFERP55789 205 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 FOXM1Q08050 763 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 SYCP1Q15431 976 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PLA2G4EQ3MJ16 856 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 TMEM71Q6P5X7 295 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 CHST15Q7LFX5 561 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PHF13Q86YI8 300 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 FAM26EQ8N5C1 309 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 KIAA1143Q96AT1 154 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 ZNF653Q96CK0 615 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 SLC45A3Q96JT2 553 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PSMG3-AS1Q96PY0 264 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 CNPY3Q9BT09 278 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 OAS3Q9Y6K5 1087 aaKnown RBP11.62□□□□□ -0.55
NSMCE1-202ENST00000561960 CLEC18AA5D8T8 446 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 HOXC4P09017 264 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 ACP5P13686 325 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 TYRP1P17643 537 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 TCN2P20062 427 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 AMPD1P23109 780 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 COL8A1P27658 744 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 DLSTP36957 453 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 GPR3P46089 330 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 SH3BP2P78314 561 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CHAF1BQ13112 559 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 LRRC66Q68CR7 880 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CLEC18BQ6UXF7 455 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 TRIM72Q6ZMU5 477 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CYP4V2Q6ZWL3 525 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CLEC18CQ8NCF0 446 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 GALNT6Q8NCL4 622 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 APOBEC4Q8WW27 367 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 MIB2Q96AX9 1013 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 RUFY1Q96T51 708 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 ASPSCR1Q9BZE9 553 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CDH19Q9H159 772 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CLSTN2Q9H4D0 955 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 RETREG1Q9H6L5 497 aa11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 TRNAU1APQ9NX07 287 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-202ENST00000561960 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms