RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FZD6O60353 706 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 FGF18O76093 207 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CNPP09543 421 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 CTSAP10619 480 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CD1EP15812 388 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CA8P35219 290 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 VHLP40337 213 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CDKN1CP49918 316 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 EPHB1P54762 984 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 INHBCP55103 352 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 SESN3P58005 492 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 AP1S1P61966 158 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TBL3Q12788 808 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 CYLC2Q14093 348 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 SETMARQ53H47 684 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 PPM1LQ5SGD2 360 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ATXN7L2Q5T6C5 722 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 PSAPL1Q6NUJ1 521 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 GAREM2Q75VX8 874 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TMC8Q8IU68 726 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PELI3Q8N2H9 469 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PTGR2Q8N8N7 351 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 DTX3LQ8TDB6 740 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TRIM43Q96BQ3 446 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 FAM136AQ96C01 138 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 MARK4Q96L34 752 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ATOH8Q96SQ7 321 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 LBHD1Q9BQE6 289 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 DERL2Q9GZP9 239 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ZBTB26Q9HCK0 441 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 COPG1Q9Y678 874 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 OAS3Q9Y6K5 1087 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 HELZP42694 1942 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 UBXN8O00124 270 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 UBFD1O14562 309 aaKnown RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 PFDN6O15212 129 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 LRG1P02750 347 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CKMP06732 381 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ACRP10323 421 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 MTHFD2P13995 350 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TTPAP49638 278 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 SLC7A9P82251 487 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 RAD51Q06609 339 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PTPRRQ15256 657 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TAF11Q15544 211 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PTPRNQ16849 979 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PAQR3Q6TCH7 311 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 PIANPQ8IYJ0 282 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 APCDD1Q8J025 514 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CPXM2Q8N436 756 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 MAB21L3Q8N8X9 362 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TTC16Q8NEE8 873 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 USP13Q92995 863 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 BHMTQ93088 406 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 KIAA1191Q96A73 305 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ZNF333Q96JL9 665 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 BIRC8Q96P09 236 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 C2orf49Q9BVC5 232 aaPredicted RBP9.78□□□□□ -0.84
SMG1-205ENST00000561947 LRRC3Q9BY71 257 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 C11orf49Q9H6J7 331 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 BPIFA1Q9NP55 256 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 CFAP97Q9P2B7 532 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 STK39Q9UEW8 545 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ANGPTL2Q9UKU9 493 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 FAM50BQ9Y247 325 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ZNF510Q9Y2H8 683 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 SH3BP1Q9Y3L3 701 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 ZNF711Q9Y462 761 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 TRAF6Q9Y4K3 522 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 PCDHB9Q9Y5E1 797 aa9.78□□□□□ -0.84
SMG1-205ENST00000561947 LCHNA4D1U4 455 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 K7ERQ8 282 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 AIM2O14862 343 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 KERAO60938 352 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 PDE5AO76074 875 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 MT-CO1P00395 513 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 PYGLP06737 847 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 PKMP14618 531 aaKnown RBP9.77□□□□□ -0.85
SMG1-205ENST00000561947 NUDT2P50583 147 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 C1QTNF8P60827 252 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 ATP6V0D1P61421 351 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 ZRANB3Q5FWF4 1079 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 ARMC12Q5T9G4 340 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 C16orf89Q6UX73 402 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 LRRC74BQ6ZQY2 392 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 CHSY3Q70JA7 882 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 HTR3DQ70Z44 454 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 FBXW8Q8N3Y1 598 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 DDI1Q8WTU0 396 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 NRG4Q8WWG1 115 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 MYO19Q96H55 970 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 ASB2Q96Q27 587 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 GPR21Q99679 349 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 WASF2Q9Y6W5 498 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 SCN8AQ9UQD0 1980 aa9.77□□□□□ -0.85
SMG1-205ENST00000561947 KIAA0355O15063 1070 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms