RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 CHFRQ96EP1 664 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 GPR78Q96P69 363 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 MTG2Q9H4K7 406 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 BRD9Q9H8M2 597 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 GTSE1Q9NYZ3 720 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 COPG2Q9UBF2 871 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 PLA2G4CQ9UP65 541 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 RUVBL2Q9Y230 463 aaKnown RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 VPS9D1Q9Y2B5 631 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 SLC30A1Q9Y6M5 507 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 PDE4DIPQ5VU43 2346 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 G3V2L1 256 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 ARNTLO00327 626 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 EBAG9O00559 213 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 PFDN6O15212 129 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 NDUFS3O75489 264 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 SRP72O76094 671 aaKnown RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 CPA3P15088 417 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 BPIP17213 487 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 LHCGRP22888 699 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 GDI1P31150 447 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 TIAL1Q01085 375 aaKnown RBP eCLIP11.28□□□□□ -0.6
PKM-205ENST00000561609 ADGRE1Q14246 886 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 ITIH4Q14624 930 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 CHI3L2Q15782 390 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 TSNAXIP1Q2TAA8 658 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 ZRANB3Q5FWF4 1079 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 CES4AQ5XG92 561 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 ATG16L1Q676U5 607 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 LRRC66Q68CR7 880 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 NAIF1Q69YI7 327 aaPredicted RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 LRRC8EQ6NSJ5 796 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 SPATA21Q7Z572 469 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 CCDC197Q8NCU1 140 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 TTC8Q8TAM2 541 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 RDH11Q8TC12 318 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 NXNL1Q96CM4 212 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 RPP25Q9BUL9 199 aaKnown RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 TRMT61BQ9BVS5 477 aaKnown RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 TSSK1BQ9BXA7 367 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 FAM96AQ9H5X1 160 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 POPDC3Q9HBV1 291 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 IGSF5Q9NSI5 407 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 MID2Q9UJV3 735 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 APPL1Q9UKG1 709 aa11.28□□□□□ -0.6
PKM-205ENST00000561609 USP15Q9Y4E8 981 aaPredicted RBP11.28□□□□□ -0.6
PKM-205ENST00000561609 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 EDDM13A0A1B0GTR0 161 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 UBA6A0AVT1 1052 aaPredicted RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 A8MX80 341 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 TARM1B6A8C7 271 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 DNAJC6O75061 913 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 SNNO75324 88 aaPredicted RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 SBK3P0C264 359 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 FGF3P11487 239 aaPredicted RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 SPAM1P38567 509 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 SLC26A3P40879 764 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 ADARP55265 1226 aaKnown RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 PTSQ03393 145 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 BST1Q10588 318 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 ZNF234Q14588 700 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 HNRNPA1L2Q32P51 320 aaKnown RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 FNDC3BQ53EP0 1204 aaKnown RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 ZNF805Q5CZA5 627 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 CERS6Q6ZMG9 384 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 EP400NLQ6ZTU2 488 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 MTSS1LQ765P7 747 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 C10orf107Q8IVU9 208 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 SFTPA1Q8IWL2 248 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 FSTL5Q8N475 847 aaPredicted RBP11.27□□□□□ -0.61
PKM-205ENST00000561609 ZNF366Q8N895 744 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 OR6Y1Q8NGX8 325 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 SUSD6Q92537 303 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 BIRC8Q96P09 236 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 TMEM245Q9H330 911 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 GPAMQ9HCL2 828 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 IL26Q9NPH9 171 aa11.27□□□□□ -0.61
PKM-205ENST00000561609 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 TBC1D3BA6NDS4 549 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 PRAMEF1O95521 474 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 C1SP09871 688 aa11.26□□□□□ -0.61
PKM-205ENST00000561609 LTA4HP09960 611 aaKnown RBP11.26□□□□□ -0.61
PKM-205ENST00000561609 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms