RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PARS2Q7L3T8 475 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 FJX1Q86VR8 437 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 NELFCDQ8IXH7 590 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 CCDC65Q8IXS2 484 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 RBMXL3Q8N7X1 1067 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 PLEKHO2Q8TD55 490 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 PARD3BQ8TEW8 1205 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 RAB7BQ96AH8 199 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 ALG14Q96F25 216 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 STAMBPL1Q96FJ0 436 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 PDXPQ96GD0 296 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 AHCYL2Q96HN2 611 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 EPSTI1Q96J88 318 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 FRMD6Q96NE9 622 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 SERPINB11Q96P15 392 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 DPYSL5Q9BPU6 564 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HEPHQ9BQS7 1158 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 CNGB3Q9NQW8 809 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 FBXO8Q9NRD0 319 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HESX1Q9UBX0 185 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 HS3ST2Q9Y278 367 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 TLR6Q9Y2C9 796 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 OR1A2Q9Y585 309 aa5.33□□□□□ -1.56
HERC1-213ENST00000561359 KLF2Q9Y5W3 355 aaPredicted RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 COPG1Q9Y678 874 aaKnown RBP5.33□□□□□ -1.56
HERC1-213ENST00000561359 IGHV1OR21-1A0A087WYE8 117 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 A6NL46 340 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 C16orf96A6NNT2 1141 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 F5H423 210 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 GRID2O43424 1007 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 F9P00740 461 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 CELA3AP09093 270 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 GNA15P30679 374 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 HNRNPH3P31942 346 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 DEKP35659 375 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 RGS7P49802 495 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 BST2Q10589 180 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 DNASE1L3Q13609 305 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 KLHL40Q2TBA0 621 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ZACNQ401N2 412 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 LRRC73Q5JTD7 316 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 MIIPQ5JXC2 388 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 KCTD16Q68DU8 428 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ARHGAP17Q68EM7 881 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ANKRD40Q6AI12 368 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 C22orf39Q6P5X5 142 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 TMEM71Q6P5X7 295 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ZNF517Q6ZMY9 492 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 HPS6Q86YV9 775 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 TP53I13Q8NBR0 393 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 SLC4A11Q8NBS3 891 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ST6GALNAC3Q8NDV1 305 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 OR52K2Q8NGK3 314 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 CCL4L1Q8NHW4 92 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 SPATA3Q8NHX4 192 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 UBA3Q8TBC4 463 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 CXorf40AQ8TE69 158 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 DQX1Q8TE96 717 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 THAP4Q8WY91 577 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 OR1E3Q8WZA6 343 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ARHGEF26Q96DR7 871 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 SLC39A13Q96H72 371 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 BTN2A3PQ96KV6 586 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 WDR92Q96MX6 357 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 RPRD1AQ96P16 312 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 LLPHQ9BRT6 129 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 APOOQ9BUR5 198 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ILKAPQ9H0C8 392 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 TMEM168Q9H0V1 697 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ACTL8Q9H568 366 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 ZDHHC6Q9H6R6 413 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 APOBEC3GQ9HC16 384 aaKnown RBP5.32□□□□□ -1.56
HERC1-213ENST00000561359 SLC12A6Q9UHW9 1150 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 VPS51Q9UID3 782 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 MOSPD1Q9UJG1 213 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 OR51B4Q9Y5P0 310 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 DGKBQ9Y6T7 804 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 MYO7BQ6PIF6 2116 aa5.32□□□□□ -1.56
HERC1-213ENST00000561359 PRRC2AP48634 2157 aaKnown RBP5.31□□□□□ -1.56
HERC1-213ENST00000561359 NYNRINQ9P2P1 1898 aaKnown RBP5.31□□□□□ -1.56
HERC1-213ENST00000561359 A0A1B0GUH1 482 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 ZNF185O15231 689 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 KIAA0754O94854 1291 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 RECKO95980 971 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 GLRBP48167 497 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 CCNHP51946 323 aaPredicted RBP5.31□□□□□ -1.56
HERC1-213ENST00000561359 NEK4P51957 841 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 RAD23BP54727 409 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 SNRPFP62306 86 aaKnown RBP5.31□□□□□ -1.56
HERC1-213ENST00000561359 PPP2R2AP63151 447 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 DLG4P78352 724 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 FOXM1Q08050 763 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 INPP5AQ14642 412 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 NR1D2Q14995 579 aa5.31□□□□□ -1.56
HERC1-213ENST00000561359 ZNF630Q2M218 657 aaPredicted RBP5.31□□□□□ -1.56
HERC1-213ENST00000561359 FBXL22Q6P050 247 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms