RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 KCTD5Q9NXV2 234 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 B4GALT6Q9UBX8 382 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 DCDC2Q9UHG0 476 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 GGT7Q9UJ14 662 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 TLK1Q9UKI8 766 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 ADAM21Q9UKJ8 722 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SARDHQ9UL12 918 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SLC39A10Q9ULF5 831 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SCML1Q9UN30 329 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 FNDC3AQ9Y2H6 1198 aaKnown RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 MTO1Q9Y2Z2 717 aaKnown RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 PLXNB3Q9ULL4 1909 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 DOCK9Q9BZ29 2069 aa10.27□□□□□ -0.76
USP3-219ENST00000561326 GLYATL1P3A0A0U1RQE8 302 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 TMEM120BA0PK00 339 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 OR51F1A6NGY5 319 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 CCL22O00626 93 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 NARSO43776 548 aaKnown RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 RFPL1O75677 317 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SRP72O76094 671 aaKnown RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 ZWINTO95229 277 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 KLF8O95600 359 aaPredicted RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 ELFN1P0C7U0 828 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 PYGBP11216 843 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 HOXB2P14652 356 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 IL9P15248 144 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 STMN1P16949 149 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 BPIP17213 487 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 CRABP2P29373 138 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 PSMD8P48556 350 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SPINT3P49223 89 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 STC1P52823 247 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 CBX1P83916 185 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SATB1Q01826 763 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 TFF2Q03403 129 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 PRKCQQ04759 706 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SLC18A2Q05940 514 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ITGA9Q13797 1035 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 BMPR2Q13873 1038 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 USP10Q14694 798 aaKnown RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 PTPRRQ15256 657 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 MLF2Q15773 248 aaPredicted RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 TYSND1Q2T9J0 566 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 POM121L1PQ3SYA9 428 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 TAF1BQ53T94 588 aaPredicted RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 PARS2Q7L3T8 475 aaKnown RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 TSPAN33Q86UF1 283 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 LCA5Q86VQ0 697 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 NRSN1Q8IZ57 195 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 C4orf33Q8N1A6 199 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 BANPQ8N9N5 519 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 IL17RCQ8NAC3 791 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ZNF398Q8TD17 642 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 DTX3LQ8TDB6 740 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 MZB1Q8WU39 189 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 EID2BQ96D98 161 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ATXN7L3BQ96GX2 97 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ELMO2Q96JJ3 720 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SERAC1Q96JX3 654 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 NELL2Q99435 816 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 GPR22Q99680 433 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 OMDQ99983 421 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ASB8Q9H765 288 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 IL26Q9NPH9 171 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 FBXO6Q9NRD1 293 aaPredicted RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 INTS9Q9NV88 658 aaKnown RBP10.27□□□□□ -0.77
USP3-219ENST00000561326 SLC17A6Q9P2U8 582 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 HCN2Q9UL51 889 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 GRID1Q9ULK0 1009 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 DUSP12Q9UNI6 340 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SORCS3Q9UPU3 1222 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 ANKRD6Q9Y2G4 727 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 COMMD10Q9Y6G5 202 aa10.27□□□□□ -0.77
USP3-219ENST00000561326 SZT2Q5T011 3432 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 PLXNA2O75051 1894 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 A0A0U1RQS6 177 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FAM95CA0A1B0GW59 222 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 HMX2A2RU54 273 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FOXO6A8MYZ6 492 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 F8W8V4 182 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 GOLGA8RI6L899 631 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 TM9SF1O15321 606 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 TSPAN6O43657 245 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 SPAG7O75391 227 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 DNTTP04053 509 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 GSTA1P08263 222 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 COL6A2P12110 1019 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 ADRB3P13945 408 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 SAT1P21673 171 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 GABRB3P28472 473 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 FOXN2P32314 431 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 MMP12P39900 470 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 MDH1P40925 334 aaKnown RBP10.26□□□□□ -0.77
USP3-219ENST00000561326 PTGER3P43115 390 aa10.26□□□□□ -0.77
USP3-219ENST00000561326 XIAPP98170 497 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms