RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 FAM83DQ9H4H8 585 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 EPB41L5Q9HCM4 733 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 XAB2Q9HCS7 855 aaKnown RBP10.25□□□□□ -0.77
LRRC28-221ENST00000561276 TM9SF3Q9HD45 589 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 CHRAC1Q9NRG0 131 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 RAD18Q9NS91 495 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 GRHL1Q9NZI5 618 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 SMG5Q9UPR3 1016 aaKnown RBP10.25□□□□□ -0.77
LRRC28-221ENST00000561276 FNDC3AQ9Y2H6 1198 aaKnown RBP10.25□□□□□ -0.77
LRRC28-221ENST00000561276 PLXNB3Q9ULL4 1909 aa10.25□□□□□ -0.77
LRRC28-221ENST00000561276 A0A1B0GTW7 788 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 ESYT3A0FGR9 886 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 MAGEB16A2A368 324 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 CCDC78A2IDD5 438 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PRR5-ARHGAP8B1AHC4 643 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 BHMG1C9JSJ3 638 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 K7ESM1 405 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 EPN2O95208 641 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 WNT1P04628 370 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 RHOXF2BP0C7M4 288 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 IGFALSP35858 605 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 TRIM23P36406 574 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 HADHAP40939 763 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 DPP6P42658 865 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PLTPP55058 493 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 TMPRSS15P98073 1019 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 IRF4Q15306 451 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 CCDC6Q16204 474 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 DUOXA1Q1HG43 343 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 SKIDA1Q1XH10 827 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 MSS51Q4VC12 460 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PEAR1Q5VY43 1037 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 ALS2CLQ60I27 953 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 GCNT7Q6ZNI0 430 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 ZNF765Q7L2R6 523 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PELI3Q8N2H9 469 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 MPP5Q8N3R9 675 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 ZCCHC9Q8N567 271 aaKnown RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 MFSD2AQ8NA29 543 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 DENND6BQ8NEG7 585 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PPHLN1Q8NEY8 458 aaKnown RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 STYXQ8WUJ0 223 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 KLHDC7BQ96G42 594 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 CDKN2AIPNLQ96HQ2 116 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 SLC6A18Q96N87 628 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PLEKHG4BQ96PX9 1271 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PHOX2BQ99453 314 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 AGAP2Q99490 1192 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 C19orf43Q9BQ61 176 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 RHOXF2Q9BQY4 288 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 CDH19Q9H159 772 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 NLE1Q9NVX2 485 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-221ENST00000561276 SYBUQ9NX95 663 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 SUSD2Q9UGT4 822 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 PCDHGA5Q9Y5G8 931 aa10.24□□□□□ -0.77
LRRC28-221ENST00000561276 A0A1W2PR77 199 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 A6NNZ2 444 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 PATE3B3GLJ2 98 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 PROB1E7EW31 1015 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 CCL22O00626 93 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 BANF1O75531 89 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 SLU7O95391 586 aaKnown RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 PCCBP05166 539 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 RETP07949 1114 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 TSHRP16473 764 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 NMBRP28336 390 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 HOXD12P35452 270 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 MPLP40238 635 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 MAGEA3P43357 314 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 GPR1P46091 355 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 AFF3P51826 1226 aaKnown RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 ZNF140P52738 457 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 EMP3P54852 163 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 NHLH1Q02575 133 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 CAV1Q03135 178 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 TEAD4Q15561 434 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 HP1BP3Q5SSJ5 553 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 TSTD2Q5T7W7 516 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 HENMT1Q5T8I9 393 aaKnown RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 ZDHHC20Q5W0Z9 365 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 ESRP1Q6NXG1 681 aaKnown RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 CASC4Q6P4E1 433 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 KDM7AQ6ZMT4 941 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 Q6ZSR6 202 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 NLRP9Q7RTR0 991 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 RABEPKQ7Z6M1 372 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 ABI3BPQ7Z7G0 1075 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 PDIK1LQ8N165 341 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 AGGF1Q8N302 714 aaeCLIP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 CEP76Q8TAP6 659 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 FBXO25Q8TCJ0 367 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 IFT81Q8WYA0 676 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 DNAJC1Q96KC8 554 aaKnown RBP10.23□□□□□ -0.77
LRRC28-221ENST00000561276 TBATAQ96M53 351 aa10.23□□□□□ -0.77
LRRC28-221ENST00000561276 APOOQ9BUR5 198 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms