RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TP53TG5Q9Y2B4 290 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 UNC79Q9P2D8 2635 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 UTP20O75691 2785 aaKnown RBP18.46■□□□□ 0.55
TPM1-226ENST00000560959 POLR1CO15160 346 aaPredicted RBP18.45■□□□□ 0.54
TPM1-226ENST00000560959 RECKO95980 971 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 CYP2A6P11509 494 aaPredicted RBP18.45■□□□□ 0.54
TPM1-226ENST00000560959 DESP17661 470 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 SOX5P35711 763 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 ETV3P41162 512 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 PYCR3Q53H96 274 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 RAET1GQ6H3X3 334 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 CCDC13Q8IYE1 715 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 SLC37A2Q8TED4 501 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 SH3KBP1Q96B97 665 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 PCDHB18PQ96TA0 734 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 CTRCQ99895 268 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 GANQ9H2C0 597 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 SP110Q9HB58 689 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 PPIL1Q9Y3C6 166 aa18.45■□□□□ 0.54
TPM1-226ENST00000560959 SPTBN1Q01082 2364 aaKnown RBP18.44■□□□□ 0.54
TPM1-226ENST00000560959 GADD45BO75293 160 aaPredicted RBP18.44■□□□□ 0.54
TPM1-226ENST00000560959 HSPA9P38646 679 aaKnown RBP18.44■□□□□ 0.54
TPM1-226ENST00000560959 EPHA4P54764 986 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 JAM2P57087 298 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 C16orf46Q6P387 395 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 ADAMTSL4Q6UY14 1074 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 Q6ZVL8 140 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 HSD11B1LQ7Z5J1 315 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 TECPR1Q7Z6L1 1165 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 ARHGAP12Q8IWW6 846 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 GALNT11Q8NCW6 608 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 SCRN2Q96FV2 425 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 ZMYND15Q9H091 742 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 EPB41L1Q9H4G0 881 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 SARS2Q9NP81 518 aaKnown RBP18.44■□□□□ 0.54
TPM1-226ENST00000560959 PLEKHM1Q9Y4G2 1056 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 RPS6KL1Q9Y6S9 549 aa18.44■□□□□ 0.54
TPM1-226ENST00000560959 ENO4A6NNW6 628 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 A8MU76 341 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 EEF2KO00418 725 aaKnown RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 PES1O00541 588 aaKnown RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 VPS4BO75351 444 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 PYGLP06737 847 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 KRT7P08729 469 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 GPR1P46091 355 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 MLLT10P55197 1068 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 RPL7AP62424 266 aaKnown RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 LBRQ14739 615 aaKnown RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 RALGPS1Q5JS13 557 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 PPP1R15BQ5SWA1 713 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 FHL5Q5TD97 284 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 MON1BQ7L1V2 547 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 MCCC1Q96RQ3 725 aaPredicted RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 NUDCD1Q96RS6 583 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 VPS16Q9H269 839 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 STN1Q9H668 368 aaKnown RBP18.43■□□□□ 0.54
TPM1-226ENST00000560959 APMAPQ9HDC9 416 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 VPS4AQ9UN37 437 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 PCDHGC4Q9Y5F7 938 aa18.43■□□□□ 0.54
TPM1-226ENST00000560959 ICE1Q9Y2F5 2266 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 SOD1P00441 154 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 CPP00450 1065 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 ANKRD34CP0C6C1 535 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 LHCGRP22888 699 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 ZNF135P52742 658 aaPredicted RBP18.42■□□□□ 0.54
TPM1-226ENST00000560959 HHEXQ03014 270 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 CAMK4Q16566 473 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 SNAP47Q5SQN1 464 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 ERMARDQ5T6L9 678 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 DENND2CQ68D51 928 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 IYDQ6PHW0 289 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 RFX8Q6ZV50 586 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 ASB18Q6ZVZ8 466 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 NCSTNQ92542 709 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 MCEEQ96PE7 176 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 CUEDC1Q9NWM3 386 aaPredicted RBP18.42■□□□□ 0.54
TPM1-226ENST00000560959 AP4E1Q9UPM8 1137 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 POLHQ9Y253 713 aa18.42■□□□□ 0.54
TPM1-226ENST00000560959 DFFAO00273 331 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 DAPK3O43293 454 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 AGFG2O95081 481 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 ERCC2P18074 760 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 F8A1P23610 371 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 EEF1GP26641 437 aaKnown RBP18.41■□□□□ 0.54
TPM1-226ENST00000560959 HCAR3P49019 387 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 POLR2FP61218 127 aaKnown RBP18.41■□□□□ 0.54
TPM1-226ENST00000560959 SLC10A7Q0GE19 358 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 TCP11X2Q5H9J9 407 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 ATP1A1-AS1Q5TC04 95 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 CAPRIN2Q6IMN6 1127 aaKnown RBP18.41■□□□□ 0.54
TPM1-226ENST00000560959 ARHGAP36Q6ZRI8 547 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 ZNF765Q7L2R6 523 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 SLC9B2Q86UD5 537 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 ZNF761Q86XN6 746 aaPredicted RBP18.41■□□□□ 0.54
TPM1-226ENST00000560959 GALNT13Q8IUC8 556 aa18.41■□□□□ 0.54
TPM1-226ENST00000560959 RAVER1Q8IY67 606 aaKnown RBP18.41■□□□□ 0.54
TPM1-226ENST00000560959 SIDT1Q9NXL6 827 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms