RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 TAF1AQ15573 450 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 HIF1AQ16665 826 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SWI5Q1ZZU3 235 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 CCDC38Q502W7 563 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 USP39Q53GS9 565 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 PMS2CLQ68D20 193 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 DENND2CQ68D51 928 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 KIAA0895LQ68EN5 471 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 CCDC70Q6NSX1 233 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 NEK5Q6P3R8 708 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SLC36A4Q6YBV0 504 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 TECPR1Q7Z6L1 1165 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SLC41A1Q8IVJ1 513 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 NDUFAF2Q8N183 169 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 PELI3Q8N2H9 469 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 PPHLN1Q8NEY8 458 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 OR13C4Q8NGS5 318 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 OR13J1Q8NGT2 312 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 BRSK1Q8TDC3 778 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 RUBCNQ92622 972 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 BIRC7Q96CA5 298 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 DNAJC1Q96KC8 554 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SIGLEC10Q96LC7 697 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 ZNF778Q96MU6 729 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SRPK1Q96SB4 655 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 GPR174Q9BXC1 333 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 FRMD8Q9BZ67 464 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 FAM129AQ9BZQ8 928 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 IL22Q9GZX6 179 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 PCED1AQ9H1Q7 454 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 EBF2Q9HAK2 575 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 ZFYVE1Q9HBF4 777 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 MRM3Q9HC36 420 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 FZD3Q9NPG1 666 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 DNAAF2Q9NVR5 837 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 IL17CQ9P0M4 197 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SOX13Q9UN79 622 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 KCTD3Q9Y597 815 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 PCDHGA2Q9Y5H1 932 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 TEX264Q9Y6I9 313 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 SLCO1B1Q9Y6L6 691 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 THADAQ6YHU6 1953 aa7.02□□□□□ -1.29
CTDSPL2-210ENST00000560834 TRPM6Q9BX84 2022 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 PCDH15Q96QU1 1955 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3DA0A087WVF3 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3IA0A087WXS9 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3EA0A087X179 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3KA0A087X1G2 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 HEATR9A2RTY3 570 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3FA6NER0 549 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3LB9A6J9 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 H7C0S8 307 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 DLL1O00548 723 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 CCL22O00626 93 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 GPR39O43194 453 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TM7SF2O76062 418 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 RECQL5O94762 991 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 FSBPO95073 299 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 CRTAMO95727 393 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3HP0C7X1 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 BPIP17213 487 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 LPOP22079 712 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ADRA1DP25100 572 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ARNTP27540 789 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 NMBRP28336 390 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 MAT2AP31153 395 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ETV3P41162 512 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 NPY2RP49146 381 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ARSDP51689 593 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ARL4CP56559 192 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 VSNL1P62760 191 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 CUL1Q13616 776 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 NAA30Q147X3 362 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 IRF4Q15306 451 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ERCC6LQ2NKX8 1250 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 BBS9Q3SYG4 887 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 PLK5Q496M5 336 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 DNAJC21Q5F1R6 531 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 PCID2Q5JVF3 399 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 UBAP2Q5T6F2 1119 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TSTD2Q5T7W7 516 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 HENMT1Q5T8I9 393 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ARMC3Q5W041 872 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 STEAP4Q687X5 459 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3GQ6DHY5 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBC1D3CQ6IPX1 549 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ESRP1Q6NXG1 681 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 KDM7AQ6ZMT4 941 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 GCNT7Q6ZNI0 430 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 Q6ZVL8 140 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 ZNF765Q7L2R6 523 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 C11orf74Q86VG3 221 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 IGDCC3Q8IVU1 814 aa7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 RAVER1Q8IY67 606 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-210ENST00000560834 TMEFF1Q8IYR6 380 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms