RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 NAT6Q93015 286 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 CARS2Q9HA77 564 aaKnown RBP13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 PCDH9Q9HC56 1237 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 EVA1BQ9NVM1 165 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 MOSPD1Q9UJG1 213 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 SUFUQ9UMX1 484 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 PLEKHM1Q9Y4G2 1056 aa13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 PCYT1BQ9Y5K3 369 aaPredicted RBP13.97□□□□□ -0.17
TNFAIP2-207ENST00000560562 A0A1W2PQM1 296 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 RCCD1A6NED2 376 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 B4DGG1 531 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 KRT10P13645 584 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 KELP23276 732 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 AK4P27144 223 aaPredicted RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 TEAD1P28347 426 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 MAGEA1P43355 309 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 RPIAP49247 311 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 HADHBP55084 474 aaKnown RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 AP1B1Q10567 949 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 OGFOD3Q6PK18 319 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 DOK6Q6PKX4 331 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 RBM44Q6ZP01 1051 aaKnown RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 TAF8Q7Z7C8 310 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 PDZD3Q86UT5 571 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 RFX6Q8HWS3 928 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 RHOT1Q8IXI2 618 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 C17orf53Q8N3J3 647 aaPredicted RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 SDR16C5Q8N3Y7 309 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 FAM46DQ8NEK8 389 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 GLMNQ92990 594 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 AP2M1Q96CW1 435 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 EID2BQ96D98 161 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 PRR11Q96HE9 360 aaPredicted RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 TRIB3Q96RU7 358 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 LYSMD1Q96S90 227 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 ASCL3Q9NQ33 180 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 SPATS2LQ9NUQ6 558 aaKnown RBP13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 SATB2Q9UPW6 733 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 SLC17A4Q9Y2C5 497 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 ALG6Q9Y672 507 aa13.96□□□□□ -0.18
TNFAIP2-207ENST00000560562 SPOPO43791 374 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 CES1P23141 567 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 SLC1A1P43005 524 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 GNPDA1P46926 289 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 EPHB1P54762 984 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 CCL7P80098 99 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 GALNT3Q14435 633 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 C3orf38Q5JPI3 329 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 ADAMTSL4Q6UY14 1074 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 GPBAR1Q8TDU6 330 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 KRT35Q92764 455 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 TADA1Q96BN2 335 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 IMP4Q96G21 291 aaKnown RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 SCARF2Q96GP6 870 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 RIOK2Q9BVS4 552 aaKnown RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 SYNDIG1Q9H7V2 258 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 TMEM98Q9Y2Y6 226 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 REXO2Q9Y3B8 237 aaKnown RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 PCDHA13Q9Y5I0 950 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 RNF215Q9Y6U7 377 aa13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
TNFAIP2-207ENST00000560562 CFAP46Q8IYW2 2715 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 TCEA3O75764 348 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 DXOO77932 396 aaKnown RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 RPLP0P05388 317 aaKnown RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 PIRTP0C851 137 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 ZNF30P17039 623 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 FECHP22830 423 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 NFKBIAP25963 317 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 GPR1P46091 355 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 LSSP48449 732 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 MAZP56270 477 aaKnown RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 PDK1Q15118 436 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 PRKD1Q15139 912 aaPredicted RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 ZNF765Q7L2R6 523 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 TMPRSS9Q7Z410 1059 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 KDELC2Q7Z4H8 507 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 C17orf82Q86X59 251 aaPredicted RBP13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 SPATA22Q8NHS9 363 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 FGF11Q92914 225 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 COX14Q96I36 57 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 HIC2Q96JB3 615 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 PANX2Q96RD6 677 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 HERPUD2Q9BSE4 406 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 POLR1BQ9H9Y6 1135 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
TNFAIP2-207ENST00000560562 DDX56Q9NY93 547 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms