RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 SEPT6Q14141 434 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 PNCKQ6P2M8 343 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 Q6ZSR6 202 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 MAATS1Q7Z4T9 603 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 SPATS2Q86XZ4 545 aaKnown RBP21.7■■□□□ 1.06
SNX1-210ENST00000560260 AGGF1Q8N302 714 aaeCLIP21.7■■□□□ 1.06
SNX1-210ENST00000560260 MMGT1Q8N4V1 131 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 CEP76Q8TAP6 659 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 SERPINB12Q96P63 405 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 L2HGDHQ9H9P8 463 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 SEMA4GQ9NTN9 838 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 SLC6A14Q9UN76 642 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 SNX24Q9Y343 169 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 OR1A2Q9Y585 309 aa21.7■■□□□ 1.06
SNX1-210ENST00000560260 TMEM131Q92545 1883 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CCDC78A2IDD5 438 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CTAGE15A4D2H0 777 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 RGSL1A5PLK6 1076 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 EFCAB8A8MWE9 144 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 FADS2P1A8MWK0 482 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CCL22O00626 93 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 SEC31AO94979 1220 aaKnown RBP21.69■■□□□ 1.06
SNX1-210ENST00000560260 ZNF806P0C7X5 589 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CTAGE8P0CG41 777 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 LPOP22079 712 aaPredicted RBP21.69■■□□□ 1.06
SNX1-210ENST00000560260 MGAT1P26572 445 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 DCDC1P59894 354 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 KIF19Q2TAC6 998 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 DUPD1Q68J44 220 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 RAET1GQ6H3X3 334 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 RABEPKQ7Z6M1 372 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CTAGE6Q86UF2 777 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 IQCHQ86VS3 1027 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 CTAGE4Q8IX94 777 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 MNS1Q8NEH6 495 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 OR4K2Q8NGD2 314 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 DNAJC1Q96KC8 554 aaKnown RBP21.69■■□□□ 1.06
SNX1-210ENST00000560260 ERP44Q9BS26 406 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 LRRC1Q9BTT6 524 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 FAM83DQ9H4H8 585 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 SYBUQ9NX95 663 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 FKBPLQ9UIM3 349 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 ANKRD6Q9Y2G4 727 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 SNX11Q9Y5W9 270 aa21.69■■□□□ 1.06
SNX1-210ENST00000560260 MROH6A6NGR9 719 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 TLR4O00206 839 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 GPR39O43194 453 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 LRP3O75074 770 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 CRTAMO95727 393 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 TSHRP16473 764 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 CA5AP35218 305 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 TRIM23P36406 574 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 CTSKP43235 329 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 MAGEA3P43357 314 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 ITGA8P53708 1063 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 TEAD4Q15561 434 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 CSRP2Q16527 193 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 HIBCHQ6NVY1 386 aaPredicted RBP21.68■■□□□ 1.06
SNX1-210ENST00000560260 C8orf74Q6P047 294 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 NLRP8Q86W28 1048 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 MPP5Q8N3R9 675 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 KLHDC7BQ96G42 594 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 SNF8Q96H20 258 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 PWWP2AQ96N64 755 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 RANBP9Q96S59 729 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 APOOQ9BUR5 198 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 LGR4Q9BXB1 951 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 DPH5Q9H2P9 285 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 RXFP3Q9NSD7 469 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 KCTD5Q9NXV2 234 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 FNDC3AQ9Y2H6 1198 aaKnown RBP21.68■■□□□ 1.06
SNX1-210ENST00000560260 TCAF1Q9Y4C2 921 aa21.68■■□□□ 1.06
SNX1-210ENST00000560260 LNP1A1A4G5 178 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 C2orf81A6NN90 581 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 KHNYNO15037 678 aaKnown RBP21.67■■□□□ 1.06
SNX1-210ENST00000560260 STX7O15400 261 aaKnown RBP21.67■■□□□ 1.06
SNX1-210ENST00000560260 GFRA3O60609 400 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 SPAM1P38567 509 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 RABIFP47224 123 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 TMPRSS15P98073 1019 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 SLC7A5Q01650 507 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 KCTD16Q68DU8 428 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 HOOK3Q86VS8 718 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 HEATR4Q86WZ0 1026 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 CEP112Q8N8E3 955 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 OR2I1PQ8NGU4 316 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 ZNF778Q96MU6 729 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 HINFPQ9BQA5 517 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 IL26Q9NPH9 171 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 GRHL1Q9NZI5 618 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 SLC2A6Q9UGQ3 507 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 TMPRSS11EQ9UL52 423 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 CNOT6Q9ULM6 557 aaKnown RBP21.67■■□□□ 1.06
SNX1-210ENST00000560260 PNMA8BQ9ULN7 279 aaPredicted RBP21.67■■□□□ 1.06
SNX1-210ENST00000560260 PKP3Q9Y446 797 aa21.67■■□□□ 1.06
SNX1-210ENST00000560260 EP300Q09472 2414 aaPredicted RBP21.66■■□□□ 1.06
SNX1-210ENST00000560260 MLNP12872 115 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 ENGP17813 658 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 PSMA3P25788 255 aa21.66■■□□□ 1.06
SNX1-210ENST00000560260 TEAD1P28347 426 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms