RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MTF2Q9Y483 593 aaPredicted RBP12.16□□□□□ -0.46
HERC1-205ENST00000559886 PLXNB3Q9ULL4 1909 aa12.16□□□□□ -0.46
HERC1-205ENST00000559886 TRPM6Q9BX84 2022 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 HMX2A2RU54 273 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 SNRPAP09012 282 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 OGNP20774 298 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 LEPRP48357 1165 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 MPP1Q00013 466 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FZD5Q13467 585 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 LRRC32Q14392 662 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FASTKD1Q53R41 847 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 AGBL4Q5VU57 503 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 ZDHHC20Q5W0Z9 365 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 Q6ZS52 159 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 TAOK1Q7L7X3 1001 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 HSD11B1LQ7Z5J1 315 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 CACUL1Q86Y37 369 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 SIX5Q8N196 739 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 GPR26Q8NDV2 337 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 SCG3Q8WXD2 468 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 MTBPQ96DY7 904 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 NELL2Q99435 816 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 PKD2L2Q9NZM6 624 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FADS3Q9Y5Q0 445 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FOXO6A8MYZ6 492 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 PSMD11O00231 422 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 AP1G1O43747 822 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 S1PR4O95977 384 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 ITGA2BP08514 1039 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 F7P08709 466 aaPredicted RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 ELFN1P0C7U0 828 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 KRT15P19012 456 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 SPRP35270 261 aaPredicted RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 SPAM1P38567 509 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 LIMK2P53671 638 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 ZBTB16Q05516 673 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 CCDC15Q0P6D6 951 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 SEMA3AQ14563 771 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 CRY1Q16526 586 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 TMEM52BQ4KMG9 183 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 RFLNAQ6ZTI6 216 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 HDDC3Q8N4P3 179 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 OTUD6BQ8N6M0 293 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FAM131CQ96AQ9 280 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 RHOJQ9H4E5 214 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
HERC1-205ENST00000559886 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
HERC1-205ENST00000559886 GLYATL1P3A0A0U1RQE8 302 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 RGSL1A5PLK6 1076 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 TRIM49D1C9J1S8 452 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SRP72O76094 671 aaKnown RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 DNTTP04053 509 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 PRSS56P0CW18 603 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 LIG3P49916 1009 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 MAGOHP61326 146 aaKnown RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 CACNG1Q06432 222 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 UBXN2BQ14CS0 331 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 MROH9Q5TGP6 573 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 FAM151BQ6UXP7 276 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 TECPR1Q7Z6L1 1165 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SDCCAG8Q86SQ7 713 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 LDB1Q86U70 411 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 EXOC3L1Q86VI1 746 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 PIANPQ8IYJ0 282 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 GJD3Q8N144 294 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 TCF12Q99081 682 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SLC6A17Q9H1V8 727 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 NFKBIL1Q9UBC1 381 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 SERGEFQ9UGK8 458 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SLC30A1Q9Y6M5 507 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 A0A1W2PP55 124 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 FAM170BA6NMN3 283 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 HAUS5O94927 633 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 OAS2P29728 719 aaKnown RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 CDKN1CP49918 316 aaPredicted RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 TAS2R38P59533 333 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 DCDC1P59894 354 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 DNAJC3Q13217 504 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 BMPR2Q13873 1038 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 ZRANB3Q5FWF4 1079 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 PSAPL1Q6NUJ1 521 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 Q6ZVL8 140 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 PNPLA1Q8N8W4 532 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 SIPA1Q96FS4 1042 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 OMDQ99983 421 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 WRAP53Q9BUR4 548 aaKnown RBP12.14□□□□□ -0.47
HERC1-205ENST00000559886 FOXQ1Q9C009 403 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 CDH19Q9H159 772 aa12.14□□□□□ -0.47
HERC1-205ENST00000559886 CD320Q9NPF0 282 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms