RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PIP4K2CQ8TBX8 421 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NAT14Q8WUY8 206 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 EME1Q96AY2 570 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ATOH8Q96SQ7 321 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SLC25A23Q9BV35 468 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SEMA4BQ9NPR2 832 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM181Q9P2C4 612 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 EPS15L1Q9UBC2 864 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 FNDC3AQ9Y2H6 1198 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 MED16Q9Y2X0 877 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ZFP37Q9Y6Q3 630 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 A0A0J9YYE9 177 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 AZIN1O14977 448 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CAPN3P20807 821 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ATP6V1B2P21281 511 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 EEF1DP29692 281 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 STC1P52823 247 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 ACLYP53396 1101 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 STX1BP61266 288 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CAPRIN1Q14444 709 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 RTP2Q5QGT7 225 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 C8orf82Q6P1X6 216 aaPredicted RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TAS1R1Q7RTX1 841 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 MFN1Q8IWA4 741 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CATSPER1Q8NEC5 780 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 OR4K2Q8NGD2 314 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 GPR150Q8NGU9 434 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 BRSK1Q8TDC3 778 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NMD3Q96D46 503 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CDKN2AIPNLQ96HQ2 116 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TRIB3Q96RU7 358 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SLC30A3Q99726 388 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SLC29A1Q99808 456 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 TRMOQ9BU70 441 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 Q9H521 79 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 MARCH5Q9NX47 278 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 CNOT6Q9ULM6 557 aaKnown RBP10.02□□□□□ -0.81
LRRC28-216ENST00000559819 SNX13Q9Y5W8 968 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.81
LRRC28-216ENST00000559819 NPEPPSL1A6NEC2 478 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 FAM155AB1AL88 458 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 F5H5T6 163 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 CDC7O00311 574 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 AP1G1O43747 822 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TIPRLO75663 272 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 GJB5O95377 273 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 CAPNS1P04632 268 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TFAP2AP05549 437 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SERPINF2P08697 491 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SPATA31D3P0C874 917 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 PRDX3P30048 256 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SLC26A3P40879 764 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SCNN1BP51168 640 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SUOXP51687 545 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SGSHP51688 502 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RPS24P62847 133 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RHDQ02161 417 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 MRPL58Q14197 206 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TSNQ15631 228 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SCIMPQ6UWF3 145 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SPATA31D4Q6ZUB0 917 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM173Q86WV6 379 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 PHYKPLQ8IUZ5 450 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 MDGA1Q8NFP4 955 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RMDN1Q96DB5 314 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 PRPF18Q99633 342 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 GRIP2Q9C0E4 1043 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 OLA1Q9NTK5 396 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 MAP10Q9P2G4 905 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 HTTP42858 3142 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 NME4O00746 187 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 ENPP3O14638 875 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 SYN3O14994 580 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 ECI2O75521 394 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RTN3O95197 1032 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 NDST3O95803 873 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 MAPKAPK2P49137 400 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 AGTR2P50052 363 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 APLP1P51693 650 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 YBEYP58557 167 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 FAM189BP81408 668 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 KANK2Q63ZY3 851 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 PRSS55Q6UWB4 352 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RAB44Q7Z6P3 723 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM126BQ8IUX1 230 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 ZFAND2BQ8WV99 257 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 ESAMQ96AP7 390 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TUBGCP3Q96CW5 907 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 PRICKLE1Q96MT3 831 aaPredicted RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 NOL11Q9H8H0 719 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 POLG2Q9UHN1 485 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TSR3Q9UJK0 312 aaKnown RBP10.01□□□□□ -0.81
LRRC28-216ENST00000559819 RNF112Q9ULX5 631 aa10.01□□□□□ -0.81
LRRC28-216ENST00000559819 TCRBV3S1A0A5B6 114 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 OR1I1O60431 355 aa10□□□□□ -0.81
LRRC28-216ENST00000559819 CKMT2P17540 419 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms