RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 GDPD4Q6W3E5 623 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 CRLF3Q8IUI8 442 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 CHST14Q8NCH0 376 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 GRIN3AQ8TCU5 1115 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 CYB5D2Q8WUJ1 264 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 ANKRD49Q8WVL7 239 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
USP3-213ENST00000559711 SORCS1Q8WY21 1168 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 ZFYVE19Q96K21 471 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 SCYL1Q96KG9 808 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 HEPHQ9BQS7 1158 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 EBF3Q9H4W6 596 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.38
USP3-213ENST00000559711 OTOL1A6NHN0 477 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 TTC34A8MYJ7 566 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GAPDHSO14556 408 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 ITM2AO43736 263 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 BNIP3LO60238 219 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 UGT2B4P06133 528 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 RBP1P09455 135 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 PTGER3P43115 390 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GLRBP48167 497 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 FCHO2Q0JRZ9 810 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ADAM15Q13444 863 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CSHL1Q14406 222 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GALNTL6Q49A17 601 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ZRANB3Q5FWF4 1079 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 BRAT1Q6PJG6 821 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 USP45Q70EL2 814 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SPATA6LQ8N4H0 392 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 FITM2Q8N6M3 262 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 PAF1Q8N7H5 531 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GBP7Q8N8V2 638 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 BIRC8Q96P09 236 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CIPCQ9C0C6 399 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 IL26Q9NPH9 171 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 HPS4Q9NQG7 708 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ELOVL2Q9NXB9 296 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 XPR1Q9UBH6 696 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 DCTN4Q9UJW0 460 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 APPL1Q9UKG1 709 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SLC8A2Q9UPR5 921 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 SLC30A1Q9Y6M5 507 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 WASF2Q9Y6W5 498 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 PRRC2BQ5JSZ5 2229 aaKnown RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 TRBV5-4A0A0C4DH59 114 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 NPIPB15A6NHN6 443 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 DLX3O60479 287 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SRP72O76094 671 aaKnown RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 BPIP17213 487 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 FMO4P31512 558 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SLC6A11P48066 632 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CORO7P57737 925 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SETMARQ53H47 684 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 TECRLQ5HYJ1 363 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 LIPMQ5VYY2 423 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GRAMD4Q6IC98 578 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 KLC3Q6P597 504 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 VITQ6UXI7 678 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 NAPRTQ6XQN6 538 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 TSPAN33Q86UF1 283 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 PIM3Q86V86 326 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 TDHQ8IZJ6 230 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 STK40Q8N2I9 435 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 KDM1BQ8NB78 822 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 HCAR2Q8TDS4 363 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 LRIG1Q96JA1 1093 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 SORT1Q99523 831 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
USP3-213ENST00000559711 S1PR5Q9H228 398 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CCDC68Q9H2F9 335 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 FAM96AQ9H5X1 160 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 KCNK4Q9NYG8 393 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 TAS2R13Q9NYV9 303 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 DEC1Q9P2X7 70 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 CDH23Q9H251 3354 aa12.64□□□□□ -0.39
USP3-213ENST00000559711 UBA6A0AVT1 1052 aaPredicted RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 TSPAN11A1L157 253 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 PRRT4C9JH25 899 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 LYPLA1O75608 230 aaPredicted RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 DCTN3O75935 186 aa12.63□□□□□ -0.39
USP3-213ENST00000559711 PKMP14618 531 aaKnown RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 ZNF37AP17032 561 aaPredicted RBP12.63□□□□□ -0.39
USP3-213ENST00000559711 ARRB2P32121 409 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms