RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LRRC45Q96CN5 670 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 BPIFA1Q9NP55 256 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 IL17CQ9P0M4 197 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 RNF14Q9UBS8 474 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 KLF15Q9UIH9 416 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 NEU2Q9Y3R4 380 aa20.22■□□□□ 0.83
TSPAN3-207ENST00000559494 ERI2A8K979 691 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 BUD23O43709 281 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 SUN1O94901 812 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 BPIP17213 487 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 TEAD1P28347 426 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 GRIA1P42261 906 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 GPR1P46091 355 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 FNTAP49354 379 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 IL9RQ01113 521 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 NFATC4Q14934 902 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 HENMT1Q5T8I9 393 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 RAET1GQ6H3X3 334 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 DBX2Q6ZNG2 339 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 GLT6D1Q7Z4J2 308 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 OXR1Q8N573 874 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 C16orf45Q96MC5 204 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 TEX101Q9BY14 249 aa20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 DDX47Q9H0S4 455 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 PIH1D1Q9NWS0 290 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 FEZ2Q9UHY8 353 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 CDV3Q9UKY7 258 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-207ENST00000559494 E7EVH7 732 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 PAFAH1B1P43034 410 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 LMAN1P49257 510 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 ARRB1P49407 418 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 VPS41P49754 854 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 CCT8P50990 548 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 KIAA1024LP59773 190 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 SLC14A1Q13336 389 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 PTPRCAPQ14761 206 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 ENPP7Q6UWV6 458 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 MACC1Q6ZN28 852 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 LINC00523Q86TU6 105 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 PARGQ86W56 976 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 HEATR4Q86WZ0 1026 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 OR52K1Q8NGK4 314 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 BRSK1Q8TDC3 778 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 WDR26Q9H7D7 661 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 DNAJC28Q9NX36 388 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 CNOT6Q9ULM6 557 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 KCTD3Q9Y597 815 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 PCDHGB2Q9Y5G2 931 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 ARL5AQ9Y689 179 aa20.2■□□□□ 0.82
TSPAN3-207ENST00000559494 TMEM202A6NGA9 273 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 CACNB4O00305 520 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 PCDHGA12O60330 932 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 CSF2P04141 144 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 APRTP07741 180 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 CDK3Q00526 305 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 TAF1AQ15573 450 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 ALS2CLQ60I27 953 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 KCTD16Q68DU8 428 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 ADAMTSL4Q6UY14 1074 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 KANSL1Q7Z3B3 1105 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 GATAD2AQ86YP4 633 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 SAP25Q8TEE9 199 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 TSACCQ96A04 125 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 TCEAL2Q9H3H9 227 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 PHPT1Q9NRX4 125 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 RAD18Q9NS91 495 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 DLL3Q9NYJ7 618 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 NFKBIL1Q9UBC1 381 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 PCYOX1Q9UHG3 505 aa20.19■□□□□ 0.82
TSPAN3-207ENST00000559494 SCN8AQ9UQD0 1980 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 FADS2P1A8MWK0 482 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 NME1P15531 152 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 LPOP22079 712 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 HTR1BP28222 390 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 EPHA8P29322 1005 aaPredicted RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 PTGIRP43119 386 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 DCDC1P59894 354 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 BASP1P80723 227 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 GPS1Q13098 491 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 GRK7Q8WTQ7 553 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 WDR92Q96MX6 357 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 CDH19Q9H159 772 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 CASS4Q9NQ75 786 aa20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 GOLGA4Q13439 2230 aaKnown RBP20.18■□□□□ 0.82
TSPAN3-207ENST00000559494 TCRBV7S3A2A0A539 114 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 C2orf81A6NN90 581 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 STX7O15400 261 aaKnown RBP20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 YKT6O15498 198 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 LDB2O43679 373 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 SH3BP5O60239 455 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 SDC3O75056 442 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 PYGLP06737 847 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 MYCLP1P12525 358 aaPredicted RBP20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 JUNDP17535 347 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 SDHBP21912 280 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 PPARDQ03181 441 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 CDH17Q12864 832 aa20.17■□□□□ 0.82
TSPAN3-207ENST00000559494 ALG11Q2TAA5 492 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms