RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ALS2CLQ60I27 953 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 RAET1GQ6H3X3 334 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 C8orf74Q6P047 294 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 PNCKQ6P2M8 343 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 Q6ZSR6 202 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 PCGF5Q86SE9 256 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 SLC22A18ASQ8N1D0 253 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 MMGT1Q8N4V1 131 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 DCLK2Q8N568 766 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 SKA1Q96BD8 255 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 KLHDC7BQ96G42 594 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 HINFPQ9BQA5 517 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 RIOK2Q9BVS4 552 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 TRIM31Q9BZY9 425 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 FAM83DQ9H4H8 585 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 L2HGDHQ9H9P8 463 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 XAB2Q9HCS7 855 aaKnown RBP21.6■■□□□ 1.05
SNX1-206ENST00000559389 BPIFA1Q9NP55 256 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 FSCN3Q9NQT6 498 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 KCTD3Q9Y597 815 aa21.6■■□□□ 1.05
SNX1-206ENST00000559389 MROH6A6NGR9 719 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 STX7O15400 261 aaKnown RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 GFRA3O60609 400 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 MAGEC1O60732 1142 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 PYGLP06737 847 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 MLNP12872 115 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 TRIM23P36406 574 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 SPAM1P38567 509 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 MAGEA3P43357 314 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 C21orf59P57076 290 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 SESN2P58004 480 aaPredicted RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 YPEL5P62699 121 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 SF3A2Q15428 464 aaKnown RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 ZDHHC20Q5W0Z9 365 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 CAND1Q86VP6 1230 aaKnown RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 NOA1Q8NC60 698 aaKnown RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 OR4K2Q8NGD2 314 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 SERPINB12Q96P63 405 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 ERP44Q9BS26 406 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 NUSAP1Q9BXS6 441 aaKnown RBP21.59■■□□□ 1.05
SNX1-206ENST00000559389 IL22Q9GZX6 179 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 WDR26Q9H7D7 661 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 ANKRD6Q9Y2G4 727 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 SDK1Q7Z5N4 2213 aa21.59■■□□□ 1.05
SNX1-206ENST00000559389 OTOGLQ3ZCN5 2332 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 LNP1A1A4G5 178 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 HEATR9A2RTY3 570 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 GOLGA8MH3BSY2 632 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 TLR4O00206 839 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 CTSKP43235 329 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 GPR1P46091 355 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 RPL21P46778 160 aaKnown RBP21.58■■□□□ 1.05
SNX1-206ENST00000559389 KIAA1024LP59773 190 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 IRX4P78413 519 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 PTPRCAPQ14761 206 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 MORF4L2Q15014 288 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 KIF19Q2TAC6 998 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 CCDC38Q502W7 563 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 DNTTIP2Q5QJE6 756 aaKnown RBP21.58■■□□□ 1.05
SNX1-206ENST00000559389 TPRG1LQ5T0D9 272 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 HIBCHQ6NVY1 386 aaPredicted RBP21.58■■□□□ 1.05
SNX1-206ENST00000559389 ADAMTSL4Q6UY14 1074 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 HEATR4Q86WZ0 1026 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 SPATS2Q86XZ4 545 aaKnown RBP21.58■■□□□ 1.05
SNX1-206ENST00000559389 OR13C4Q8NGS5 318 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 DNAJC1Q96KC8 554 aaKnown RBP21.58■■□□□ 1.05
SNX1-206ENST00000559389 AGAP2Q99490 1192 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 APOOQ9BUR5 198 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 CARD6Q9BX69 1037 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 TEX101Q9BY14 249 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 RAB17Q9H0T7 212 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 BFARQ9NZS9 450 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 TCAF1Q9Y4C2 921 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 OR1A2Q9Y585 309 aa21.58■■□□□ 1.05
SNX1-206ENST00000559389 FADS2P1A8MWK0 482 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 SMAPO00193 183 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 GAPDHSO14556 408 aaPredicted RBP21.57■■□□□ 1.04
SNX1-206ENST00000559389 TP73O15350 636 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 ADRA1DP25100 572 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 PSMA3P25788 255 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 MGAT1P26572 445 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 NPY2RP49146 381 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 LAMB3Q13751 1172 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 PDE1CQ14123 709 aaPredicted RBP21.57■■□□□ 1.04
SNX1-206ENST00000559389 NFATC4Q14934 902 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 DUPD1Q68J44 220 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 PRR23CQ6ZRP0 262 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 DCP2Q8IU60 420 aaKnown RBP21.57■■□□□ 1.04
SNX1-206ENST00000559389 TRAM1L1Q8N609 369 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 PPHLN1Q8NEY8 458 aaKnown RBP21.57■■□□□ 1.04
SNX1-206ENST00000559389 DTX3LQ8TDB6 740 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 STYXQ8WUJ0 223 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 FUBP1Q96AE4 644 aaKnown RBP21.57■■□□□ 1.04
SNX1-206ENST00000559389 LRRC1Q9BTT6 524 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 ZSCAN5AQ9BUG6 496 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 ZDHHC5Q9C0B5 715 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 IL26Q9NPH9 171 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 SYBUQ9NX95 663 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 SNX24Q9Y343 169 aa21.57■■□□□ 1.04
SNX1-206ENST00000559389 UTP11Q9Y3A2 253 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms