RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, human

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG21-208	ENST00000558943	ZNF274	Q96GC6	653 aa	Predicted RBP	4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	CATSPER2	Q96P56	530 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	KCNK16	Q96T55	309 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	MED10	Q9BTT4	135 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	AGXT2	Q9BYV1	514 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	RAB34	Q9BZG1	259 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	DCLK3	Q9C098	648 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	ENKD1	Q9H0I2	346 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	PRDM8	Q9NQV8	689 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	INTS7	Q9NVH2	962 aa	Known RBP	4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	PISD	Q9UG56	409 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	ITGA11	Q9UKX5	1188 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	PHTF1	Q9UMS5	762 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	DMTF1	Q9Y222	760 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	OTOG	Q6ZRI0	2925 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	CELSR2	Q9HCU4	2923 aa		4.91	□□□□□ -1.62
SPG21-208	ENST00000558943	EME2	A4GXA9	379 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	EFCAB7	A8K855	629 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	MID1	O15344	667 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	DIAPH2	O60879	1101 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	PIAS2	O75928	621 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	DNAJC8	O75937	253 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	PRPF6	O94906	941 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CLDN1	O95832	211 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	PIGR	P01833	764 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	DLD	P09622	509 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	RARG	P13631	454 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	HGF	P14210	728 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	GOT1	P17174	413 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	POLR2E	P19388	210 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	WT1	P19544	449 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	PTMS	P20962	102 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	WARS	P23381	471 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CD40	P25942	277 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	ABCD1	P33897	745 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CACNA2D1	P54289	1103 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	COG7	P83436	770 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	TRIM29	Q14134	588 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	DHX8	Q14562	1220 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	POSTN	Q15063	836 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CST6	Q15828	149 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	BMT2	Q1RMZ1	405 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	POM121L1P	Q3SYA9	428 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	SETMAR	Q53H47	684 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	LACTB2	Q53H82	288 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	C10orf120	Q5SQS8	335 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	TMEM215	Q68D42	235 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	GUSBP11	Q6P575	273 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CHST9	Q7L1S5	443 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	RSRC2	Q7L4I2	434 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	TIPARP	Q7Z3E1	657 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	MMAA	Q8IVH4	418 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	MYCT1	Q8N699	235 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	WFIKKN2	Q8TEU8	576 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	KBTBD7	Q8WVZ9	684 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	JPH3	Q8WXH2	748 aa	Predicted RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	P2RY11	Q96G91	374 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	HPDL	Q96IR7	371 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CALN1	Q9BXU9	219 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	B3GNT5	Q9BYG0	378 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	ZNF518B	Q9C0D4	1074 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	FBXO44	Q9H4M3	255 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	PREB	Q9HCU5	417 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	DNAJC28	Q9NX36	388 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	SERGEF	Q9UGK8	458 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	ITGB1BP2	Q9UKP3	347 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	CLEC4E	Q9ULY5	219 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	TNPO3	Q9Y5L0	923 aa	Known RBP	4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	ATP8B3	O60423	1300 aa		4.9	□□□□□ -1.63
SPG21-208	ENST00000558943	LY6G6E	A0A0G2JKS1	128 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	PRAMEF33	A0A0G2JMD5	474 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	ARHGAP10	A1A4S6	786 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	GAGE12B	A1L429	117 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	GRID2IP	A4D2P6	1211 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	GAGE12H	A6NDE8	117 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943		A8MXQ7	604 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	ANKRD63	C9JTQ0	380 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943		K7ENM7	598 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	CLDN5	O00501	218 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	HOXA3	O43365	443 aa	Predicted RBP	4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	HNRNPR	O43390	633 aa	Known RBP	4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	LAT	O43561	262 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	NRP2	O60462	931 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	PRAMEF10	O60809	474 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	NEBL	O76041	1014 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	STC2	O76061	302 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	CNTN5	O94779	1100 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	KLKB1	P03952	638 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	HMBS	P08397	361 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	TMEM191B	P0C7N4	346 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	RNF224	P0DH78	156 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	GIMD1	P0DJR0	217 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	GAA	P10253	952 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	C5AR1	P21730	350 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	PTX3	P26022	381 aa	Predicted RBP	4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	CD82	P27701	267 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	MAPK10	P53779	464 aa		4.89	□□□□□ -1.63
SPG21-208	ENST00000558943	SLC5A3	P53794	718 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms