RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 APOLD1Q96LR9 279 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 APOL2Q9BQE5 337 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 CNTNAP3Q9BZ76 1288 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 GBA3Q9H227 469 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 RPL26L1Q9UNX3 145 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 APOBEC2Q9Y235 224 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 C1QTNF9BB2RNN3 333 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 H7C0C1 242 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 KCNN4O15554 427 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 AQP9O43315 295 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 BUD23O43709 281 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 DNAJC6O75061 913 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 USP12O75317 370 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 LDOC1O95751 146 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 NDST3O95803 873 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 EML2O95834 649 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 CCDC175P0C221 793 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 C1QTNF9P0C862 333 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 BPIP17213 487 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 CXCR5P32302 372 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 ATP5OP48047 213 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC1A5Q15758 541 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 INAVAQ3KP66 663 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 PERM1Q5SV97 790 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 FAXCQ5TGI0 409 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 DHRS13Q6UX07 377 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 USP45Q70EL2 814 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 HID1Q8IV36 788 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC35F3Q8IY50 421 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SYCE1Q8N0S2 351 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 FAM71DQ8N9W8 422 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 LMX1AQ8TE12 382 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 C1orf54Q8WWF1 131 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 WDR92Q96MX6 357 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 TMEM121Q9BTD3 319 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 MAGEE1Q9HCI5 957 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 KLHL8Q9P2G9 620 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 FAM153AQ9UHL3 310 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC17A4Q9Y2C5 497 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 ZNF711Q9Y462 761 aa12.59□□□□□ -0.39
RABGGTA-207ENST00000558936 C1orf232A0A0U1RR37 186 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 C5orf60A6NFR6 353 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 TAF4O00268 1085 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 TOR1BO14657 336 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 LIASO43766 372 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 KRT86O43790 486 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 TJP3O95049 919 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ATP1A1P05023 1023 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ZSCAN5DPP0CG00 497 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF30P17039 623 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ACP1P24666 158 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 TEAD1P28347 426 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 HNRNPKP61978 463 aaKnown RBP eCLIP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 SMAD1Q15797 465 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ADAMTSL4Q6UY14 1074 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF765Q7L2R6 523 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 TMPRSS7Q7RTY8 843 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 RD3Q7Z3Z2 195 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 PAF1Q8N7H5 531 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 FAM181AQ8N9Y4 354 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 IPMKQ8NFU5 416 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 OR56A4Q8NGH8 313 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 AP2M1Q96CW1 435 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 RTP4Q96DX8 246 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 SPATA13Q96N96 652 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 CEP295Q9C0D2 2601 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 BPIFA1Q9NP55 256 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 SPATS2LQ9NUQ6 558 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 NLGN3Q9NZ94 848 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 IL17CQ9P0M4 197 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 NEUROG3Q9Y4Z2 214 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.4
RABGGTA-207ENST00000558936 PRSS38A1L453 326 aa12.57□□□□□ -0.4
RABGGTA-207ENST00000558936 PRR19A6NJB7 356 aa12.57□□□□□ -0.4
RABGGTA-207ENST00000558936 LMO7DNF2Z398 122 aa12.57□□□□□ -0.4
RABGGTA-207ENST00000558936 INPP4BO15327 924 aa12.57□□□□□ -0.4
RABGGTA-207ENST00000558936 NOBOXO60393 691 aa12.57□□□□□ -0.4
RABGGTA-207ENST00000558936 EPOP01588 193 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms