RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ADIPOR2Q86V24 386 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 PIM3Q86V86 326 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 PIANPQ8IYJ0 282 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 RDH11Q8TC12 318 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 ANKRD49Q8WVL7 239 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 LPGAT1Q92604 370 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 ERP27Q96DN0 273 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-207ENST00000558763 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
SMAD3-207ENST00000558763 HPS4Q9NQG7 708 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 IL17CQ9P0M4 197 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 RUVBL2Q9Y230 463 aaKnown RBP12.93□□□□□ -0.34
SMAD3-207ENST00000558763 CRYL1Q9Y2S2 319 aa12.93□□□□□ -0.34
SMAD3-207ENST00000558763 OTOL1A6NHN0 477 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 C2orf81A6NN90 581 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 GAPDHSO14556 408 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 TRIM24O15164 1050 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 SOCS5O75159 536 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 NFATC1O95644 943 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 APOA4P06727 396 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ASGR2P07307 311 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ALPIP09923 528 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MYL2P10916 166 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ADH5P11766 374 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 GRK2P25098 689 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 XIAPP98170 497 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 SLC20A2Q08357 652 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 PDGFRLQ15198 375 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 AAK1Q2M2I8 961 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 SETMARQ53H47 684 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 TECRLQ5HYJ1 363 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MRNIPQ6NTE8 343 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 PSAPL1Q6NUJ1 521 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 C22orf39Q6P5X5 142 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 AFTPHQ6ULP2 937 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 NAT16Q8N8M0 369 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 GBP7Q8N8V2 638 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 OR2AP1Q8NGE2 309 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 GABPB2Q8TAK5 448 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ISG20Q96AZ6 181 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 GATA5Q9BWX5 397 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 UNKQ9C0B0 810 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MARCOQ9UEW3 520 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 VWA7Q9Y334 891 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ZNF711Q9Y462 761 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 TRIOO75962 3097 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ZNF195O14628 629 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 DLX3O60479 287 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ADH1CP00326 375 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 PABPC1P11940 636 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 CTPS1P17812 591 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ARFIP2P53365 341 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ABCE1P61221 599 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 LYSMD3Q7Z3D4 306 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 METTL3Q86U44 580 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 KIAA1958Q8N8K9 716 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ECHDC3Q96DC8 303 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MOCOSQ96EN8 888 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 LRRC37BQ96QE4 947 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 BRD9Q9H8M2 597 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 ECT2Q9H8V3 914 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 INTS10Q9NVR2 710 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 KCNK4Q9NYG8 393 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 HACD3Q9P035 362 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 THEGQ9P2T0 379 aa12.92□□□□□ -0.34
SMAD3-207ENST00000558763 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 RPL26L1Q9UNX3 145 aaKnown RBP12.92□□□□□ -0.34
SMAD3-207ENST00000558763 MUC22E2RYF6 1773 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 PLXNB3Q9ULL4 1909 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 A0A0J9YYE9 177 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 GPR39O43194 453 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 TRIM13O60858 407 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 DCTN3O75935 186 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 DNAJC8O75937 253 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 IGSF6O95976 241 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 TRBC1P01850 177 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 SLC4A1P02730 911 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 T-ENOLP0DO92 83 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 ALOX15P16050 662 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 HMGCLP35914 325 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 MAPK8P45983 427 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 TUBB3Q13509 450 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 TSNAXIP1Q2TAA8 658 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 FAM45BPQ6NSW5 357 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 CLNKQ7Z7G1 428 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 MTDHQ86UE4 582 aaKnown RBP12.91□□□□□ -0.34
SMAD3-207ENST00000558763 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
SMAD3-207ENST00000558763 TXNDC5Q8NBS9 432 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms