RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ALS2CLQ60I27 953 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 TMC3Q7Z5M5 1100 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 TRIM74Q86UV6 250 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 PDXPQ96GD0 296 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 CNDP2Q96KP4 475 aaKnown RBP13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 WDR92Q96MX6 357 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 CLPBQ9H078 707 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 CARD9Q9H257 536 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 WDR26Q9H7D7 661 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 FGF22Q9HCT0 170 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 ANGPTL2Q9UKU9 493 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 TMEM98Q9Y2Y6 226 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
TSPAN3-205ENST00000558745 ASPMQ8IZT6 3477 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 C5orf60A6NFR6 353 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 CACNB4O00305 520 aaPredicted RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 TOR1BO14657 336 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 YKT6O15498 198 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ZSCAN12O43309 604 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 LDOC1O95751 146 aaPredicted RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 FGGP02679 453 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ATP1A1P05023 1023 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 TSHRP16473 764 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 HTR1BP28222 390 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 SPINT3P49223 89 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 HNRNPKP61978 463 aaKnown RBP eCLIP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 MPP3Q13368 585 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC1A5Q15758 541 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 SLC14A2Q15849 920 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 PRRT3Q5FWE3 981 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ZNF648Q5T619 568 aaPredicted RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ITPRIPL1Q6GPH6 555 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 DOK6Q6PKX4 331 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 CHCHD4Q8N4Q1 142 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 GLIS1Q8NBF1 620 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 GPR26Q8NDV2 337 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 CCHCR1Q8TD31 782 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 MS4A14Q96JA4 679 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 FERMT1Q9BQL6 677 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 GPR63Q9BZJ6 419 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 FAM83DQ9H4H8 585 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 SMARCAL1Q9NZC9 954 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 KLQ9UEF7 1012 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 FTSJ1Q9UET6 329 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 APOBEC3BQ9UH17 382 aaKnown RBP13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 PLEKHM1Q9Y4G2 1056 aa13.78□□□□□ -0.2
TSPAN3-205ENST00000558745 FADS2P1A8MWK0 482 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 YY2O15391 372 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 AQP9O43315 295 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 ANXA9O76027 345 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CEACAM5P06731 702 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 ZSCAN5DPP0CG00 497 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 ADRA1AP35348 466 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 KCNJ1P48048 391 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 HK3P52790 923 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 GEMP55040 296 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CLDN6P56747 220 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CDK3Q00526 305 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 DPTQ07507 201 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 PRPSAP1Q14558 356 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 OASLQ15646 514 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 LONRF2Q1L5Z9 754 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 MICALCLQ6ZW33 695 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 MARCH9Q86YJ5 346 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 SFTPA2Q8IWL1 248 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CCL4L1Q8NHW4 92 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 BLOC1S5Q8TDH9 187 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CDC6Q99741 560 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 SLC13A1Q9BZW2 595 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 SPASTQ9UBP0 616 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 CNOT6Q9ULM6 557 aaKnown RBP13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 KCTD3Q9Y597 815 aa13.77□□□□□ -0.21
TSPAN3-205ENST00000558745 H3BM21 787 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 TNFSF14O43557 240 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 HYAL3O43820 417 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 RASGRP1O95267 797 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 TNFP01375 233 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 IFNB1P01574 187 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 EPOP01588 193 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 HOXC4P09017 264 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 MYCLP1P12525 358 aaPredicted RBP13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 BPIP17213 487 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 TPH1P17752 444 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 CA5AP35218 305 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 PARP6Q2NL67 630 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
TSPAN3-205ENST00000558745 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms