RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CNGA3Q16281 694 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 VWA3BQ502W6 1294 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 KLHDC7AQ5VTJ3 777 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 LZTR1Q8N653 840 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 SLC37A2Q8TED4 501 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 SH3KBP1Q96B97 665 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 DTD2Q96FN9 168 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 ULBP3Q9BZM4 244 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 KLHL3Q9UH77 587 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 FZD10Q9ULW2 581 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 ST14Q9Y5Y6 855 aa17.74■□□□□ 0.43
TSPAN3-204ENST00000558394 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 A1L4Q6 167 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 MAP3K6O95382 1288 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 DLGAP3O95886 979 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 CYP1A1P04798 512 aaPredicted RBP17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 UCHL3P15374 230 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 HTR7P34969 479 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 ETV3P41162 512 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 GPR1P46091 355 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 NSFP46459 744 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 RENBPP51606 427 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 FOXM1Q08050 763 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 NFATC2Q13469 925 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 WDR59Q6PJI9 974 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 TRIM72Q6ZMU5 477 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 GALNT13Q8IUC8 556 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 PTCD2Q8WV60 388 aaKnown RBP17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 STK33Q9BYT3 514 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 SLC39A8Q9C0K1 460 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 KCND3Q9UK17 655 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 TLK1Q9UKI8 766 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 PLEKHM1Q9Y4G2 1056 aa17.73■□□□□ 0.43
TSPAN3-204ENST00000558394 SPENQ96T58 3664 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 F8VZ95 297 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 TRAFD1O14545 582 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 DAPK3O43293 454 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 CPP00450 1065 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 TEAD1P28347 426 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 CDR2Q01850 454 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 C6orf15Q6UXA7 325 aaPredicted RBP17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 MARK2Q7KZI7 788 aaKnown RBP17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 SFRP1Q8N474 314 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 SLC20A1Q8WUM9 679 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 STAMBPL1Q96FJ0 436 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 ADAM22Q9P0K1 906 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 CROTQ9UKG9 612 aa17.72■□□□□ 0.43
TSPAN3-204ENST00000558394 CDC14CA4D256 554 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 PSMD11O00231 422 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 DFFAO00273 331 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 CCP110O43303 1012 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 GFPT2O94808 682 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 F8A1P23610 371 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 PMS2P54278 862 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 LRP8Q14114 963 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 HSD11B1LQ7Z5J1 315 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 NAA15Q9BXJ9 866 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 TWSG1Q9GZX9 223 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 SARS2Q9NP81 518 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 NOCTQ9UK39 431 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 PHTF1Q9UMS5 762 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 TMEM98Q9Y2Y6 226 aa17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 OAS3Q9Y6K5 1087 aaKnown RBP17.71■□□□□ 0.43
TSPAN3-204ENST00000558394 PIPSLA2A3N6 862 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 EEF2KO00418 725 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 ASMTLO95671 621 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 DDAH2O95865 285 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 CALB1P05937 261 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 CCNYL3P0C7X3 344 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 SLC2A4P14672 509 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 EPHA4P54764 986 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 FMO1Q01740 532 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 PYCR3Q53H96 274 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 DPY19L2P1Q6NXN4 242 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 Q6ZVL8 140 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 SLC9B2Q86UD5 537 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 PLXDC1Q8IUK5 500 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 C3orf20Q8ND61 904 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 SCARF2Q96GP6 870 aaPredicted RBP17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 EPB41L1Q9H4G0 881 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 CNOT8Q9UFF9 292 aaKnown RBP17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 PCDHGC4Q9Y5F7 938 aa17.7■□□□□ 0.42
TSPAN3-204ENST00000558394 TEP1Q99973 2627 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 SIGLEC16A6NMB1 481 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 SOCS5O75159 536 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 SEMA7AO75326 666 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 CASP14P31944 242 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 GSCP56915 257 aaPredicted RBP17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 IL10RBQ08334 325 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 ZNF235Q14590 738 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 LBRQ14739 615 aaKnown RBP17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 SYCP1Q15431 976 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 DNAJC24Q6P3W2 148 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 LYSMD3Q7Z3D4 306 aa17.69■□□□□ 0.42
TSPAN3-204ENST00000558394 RASGRP3Q8IV61 690 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms