RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 BPIP17213 487 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 GRIA1P42261 906 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 PTGIRP43119 386 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 GPR1P46091 355 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 PTK2BQ14289 1009 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 TAF1AQ15573 450 aaPredicted RBP25.46■■□□□ 1.67
SMAD6-202ENST00000557916 GPR26Q8NDV2 337 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 SPATA4Q8NEY3 305 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 AGAP2Q99490 1192 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 ELF4Q99607 663 aaPredicted RBP25.46■■□□□ 1.67
SMAD6-202ENST00000557916 CDH19Q9H159 772 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 WDR26Q9H7D7 661 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.46■■□□□ 1.676e-8■□□□□ 10.2
SMAD6-202ENST00000557916 IL17CQ9P0M4 197 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 CDC23Q9UJX2 597 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 ARL5AQ9Y689 179 aa25.46■■□□□ 1.67
SMAD6-202ENST00000557916 DFNA5O60443 496 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 CRTAMO95727 393 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 PYGLP06737 847 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 HTR1BP28222 390 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 TEAD1P28347 426 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 ARHGAP8P85298 464 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 DR1Q01658 176 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 FZD2Q14332 565 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 STPG1Q5TH74 334 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 ALS2CLQ60I27 953 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 FUBP1Q96AE4 644 aaKnown RBP25.45■■□□□ 1.66
SMAD6-202ENST00000557916 CASS4Q9NQ75 786 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 PKP3Q9Y446 797 aa25.45■■□□□ 1.66
SMAD6-202ENST00000557916 C4orf47A7E2U8 309 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 CACNB4O00305 520 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 STX7O15400 261 aaKnown RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 HOXC4P09017 264 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 TPSB2P20231 275 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 LPOP22079 712 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 DCDC1P59894 354 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 CDK16Q00536 496 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 PTK6Q13882 451 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 KCNJ11Q14654 390 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 NFATC4Q14934 902 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 TPSAB1Q15661 275 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 HENMT1Q5T8I9 393 aaKnown RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 OXR1Q8N573 874 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 KRT12Q99456 494 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 TEX101Q9BY14 249 aa25.44■■□□□ 1.66
SMAD6-202ENST00000557916 PHPT1Q9NRX4 125 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 DNAAF2Q9NVR5 837 aaKnown RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 NFKBIL1Q9UBC1 381 aaPredicted RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 FNDC3AQ9Y2H6 1198 aaKnown RBP25.44■■□□□ 1.66
SMAD6-202ENST00000557916 SOD1P00441 154 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 HOXD11P31277 338 aaPredicted RBP25.43■■□□□ 1.66
SMAD6-202ENST00000557916 MAGEA6P43360 314 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 ARRB1P49407 418 aaPredicted RBP25.43■■□□□ 1.66
SMAD6-202ENST00000557916 KIAA1024LP59773 190 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 PDE1BQ01064 536 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 POU6F1Q14863 301 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 ZDHHC20Q5W0Z9 365 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 ADAMTSL4Q6UY14 1074 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 MACC1Q6ZN28 852 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 SYDE1Q6ZW31 735 aaPredicted RBP25.43■■□□□ 1.66
SMAD6-202ENST00000557916 PARGQ86W56 976 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 HEATR4Q86WZ0 1026 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 KIF18AQ8NI77 898 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 PLEKHG4BQ96PX9 1271 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 LGR4Q9BXB1 951 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 SPATA16Q9BXB7 569 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 ASIC3Q9UHC3 531 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 KCTD3Q9Y597 815 aa25.43■■□□□ 1.66
SMAD6-202ENST00000557916 A0A1B0GTQ1 180 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 TCRBV7S3A2A0A539 114 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 PPFIA2O75334 1257 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 ADCY8P40145 1251 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 LIMK1P53667 647 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 CDK3Q00526 305 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 CKAP4Q07065 602 aaKnown RBP25.42■■□□□ 1.66
SMAD6-202ENST00000557916 PTPRCAPQ14761 206 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 UAP1L1Q3KQV9 507 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 ZNF542PQ5EBM4 170 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 JAMLQ86YT9 394 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 OR4K2Q8NGD2 314 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 NETO1Q8TDF5 533 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 CPT1BQ92523 772 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 WDR92Q96MX6 357 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 DNAJC28Q9NX36 388 aa25.42■■□□□ 1.66
SMAD6-202ENST00000557916 LDB2O43679 373 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 MYCLP1P12525 358 aaPredicted RBP25.41■■□□□ 1.66
SMAD6-202ENST00000557916 KELP23276 732 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 SPAM1P38567 509 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 RXRGP48443 463 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 CCT8P50990 548 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 C2orf54Q08AI8 447 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 EIF2B5Q13144 721 aaKnown RBP25.41■■□□□ 1.66
SMAD6-202ENST00000557916 SEPT6Q14141 434 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 DHX34Q14147 1143 aaKnown RBP25.41■■□□□ 1.66
SMAD6-202ENST00000557916 CERCAMQ5T4B2 595 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 ANKRD22Q5VYY1 191 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 ENPP7Q6UWV6 458 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 ZNF572Q7Z3I7 529 aaPredicted RBP25.41■■□□□ 1.66
SMAD6-202ENST00000557916 TRAM1L1Q8N609 369 aa25.41■■□□□ 1.66
SMAD6-202ENST00000557916 ZSCAN5AQ9BUG6 496 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms