RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CSF2P04141 144 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 C1SP09871 688 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 MYCLP1P12525 358 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 MLNP12872 115 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 PSMA3P25788 255 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 GPR1P46091 355 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 NPY2RP49146 381 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 CLDN2P57739 230 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 BASP1P80723 227 aaKnown RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 MSLNQ13421 630 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 PEX6Q13608 980 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 ITGA9Q13797 1035 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 NFATC4Q14934 902 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 WHAMMP3Q1A5X7 153 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 SKIDA1Q1XH10 827 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 TTC27Q6P3X3 843 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 TTC30BQ8N4P2 665 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 SLC25A41Q8N5S1 370 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 TRAM1L1Q8N609 369 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 DNAAF3Q8N9W5 541 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 BLOC1S5Q8TDH9 187 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 CAPZA3Q96KX2 299 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 RANBP9Q96S59 729 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 IL22Q9GZX6 179 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 ABCG8Q9H221 673 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 FZD3Q9NPG1 666 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 MBNL1Q9NR56 388 aaKnown RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 BFARQ9NZS9 450 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 COQ6Q9Y2Z9 468 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 SNX11Q9Y5W9 270 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 CSNK1G3Q9Y6M4 447 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
SHMT2-234ENST00000557703 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
SHMT2-234ENST00000557703 MAGEB16A2A368 324 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 HEATR9A2RTY3 570 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 H0Y8X5 98 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 H7C0S8 307 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 SLC30A4O14863 429 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 FANCGO15287 622 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 NME1P15531 152 aaKnown RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 ADRA1DP25100 572 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 CHRNA4P43681 627 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 BNC1Q01954 994 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 GPS1Q13098 491 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 PTK6Q13882 451 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 PDE1CQ14123 709 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 CCDC6Q16204 474 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 STPG1Q5TH74 334 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 RAET1GQ6H3X3 334 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 TCEAL6Q6IPX3 200 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 LRRC8BQ6P9F7 803 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 PPP1R21Q6ZMI0 780 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 HOOK3Q86VS8 718 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 SPATS2Q86XZ4 545 aaKnown RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 C17orf53Q8N3J3 647 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 GLIS1Q8NBF1 620 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 MNS1Q8NEH6 495 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 SPATA4Q8NEY3 305 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 STYXQ8WUJ0 223 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 TCEAL3Q969E4 200 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 SGSM3Q96HU1 749 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 HIC2Q96JB3 615 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 WDR92Q96MX6 357 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 VPS35Q96QK1 796 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 RTKNQ9BST9 563 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 GTPBP2Q9BX10 602 aaKnown RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 RMI1Q9H9A7 625 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 XAB2Q9HCS7 855 aaKnown RBP13.63□□□□□ -0.23
SHMT2-234ENST00000557703 CASS4Q9NQ75 786 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 TM7SF3Q9NS93 570 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 VPS18Q9P253 973 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 SLCO1B1Q9Y6L6 691 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 PCNX2A6NKB5 2137 aa13.63□□□□□ -0.23
SHMT2-234ENST00000557703 KLHL33A6NCF5 533 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 MROH6A6NGR9 719 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 FLRT2O43155 660 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 PCCBP05166 539 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 ETS1P14921 441 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 BPIP17213 487 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SPAM1P38567 509 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 CDK3Q00526 305 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 DR1Q01658 176 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SEMG2Q02383 582 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 PPARDQ03181 441 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 FZD2Q14332 565 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 KCNJ11Q14654 390 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 LVRNQ6Q4G3 990 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 PPIL6Q8IXY8 311 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 SLC22A18ASQ8N1D0 253 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 FSTL5Q8N475 847 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-234ENST00000557703 BBOF1Q8ND07 529 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 OR56A4Q8NGH8 313 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 HEXDCQ8WVB3 486 aa13.62□□□□□ -0.23
SHMT2-234ENST00000557703 EID2BQ96D98 161 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms