RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 IGSF8Q969P0 613 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 KIF1BPQ96EK5 621 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 RRNAD1Q96FB5 475 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 HMCESQ96FZ2 354 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CDHR1Q96JP9 859 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SIN3AQ96ST3 1273 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ACOX2Q99424 681 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TKTL2Q9H0I9 626 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 POLR1BQ9H9Y6 1135 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 C17orf75Q9HAS0 396 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SMC4Q9NTJ3 1288 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 POT1Q9NUX5 634 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 COMMD8Q9NX08 183 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DCAF16Q9NXF7 216 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 QPCTLQ9NXS2 382 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 UTP6Q9NYH9 597 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SQORQ9Y6N5 450 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 MAU2Q9Y6X3 613 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DNAJC9-AS1A6NH13 148 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC188H7C350 402 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZC3H11AO75152 810 aaKnown RBP eCLIP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 GFPT2O94808 682 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 VNN2O95498 520 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FYNP06241 537 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 IGHV4-30-4P0DP06 118 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SRCP12931 536 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF23P17027 643 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NFKBIAP25963 317 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ACSL1P33121 698 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PBX3P40426 434 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FOXG1P55316 489 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 RIPK4P57078 832 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NLRP5P59047 1200 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TAS2R40P59535 323 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SIRPAP78324 504 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF91Q05481 1191 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SPOCK1Q08629 439 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 GRIK3Q13003 919 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DCTN2Q13561 401 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NEDD9Q14511 834 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 TAF7Q15545 349 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 QSOX2Q6ZRP7 698 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 DPPA4Q7L190 304 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 SPATA6LQ8N4H0 392 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZBTB2Q8N680 514 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FRMD1Q8N878 549 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC191Q8NCU4 936 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 PAPD5Q8NDF8 572 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 EIF2B3Q9NR50 452 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ANKEF1Q9NU02 776 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 GDE1Q9NZC3 331 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 XPO7Q9UIA9 1087 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 ZHX1Q9UKY1 873 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 NOL7Q9UMY1 257 aaKnown RBP1.74□□□□□ -2.13
HIF1A-212ENST00000557538 CCL27Q9Y4X3 112 aa1.74□□□□□ -2.13
HIF1A-212ENST00000557538 FAM237BA0A1B0GVD1 139 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 LILRA5A6NI73 299 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KCNU1A8MYU2 1149 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 EIF3CLB5ME19 914 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 RGS14O43566 566 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 NDUFB8O95169 186 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CBX6O95503 412 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PRLRP16471 622 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TRIM21P19474 475 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 NUDT6P53370 316 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 MC1RQ01726 317 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SREBF2Q12772 1141 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 LRMPQ12912 555 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 STK4Q13043 487 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 GPS2Q13227 327 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PDIA5Q14554 519 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PKN2Q16513 984 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SRSF7Q16629 238 aaKnown RBP eCLIP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF284Q2VY69 593 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CRY2Q49AN0 593 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 Q6ZSV7 163 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 IKBIPQ70UQ0 350 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 MON1BQ7L1V2 547 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PIM3Q86V86 326 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 FOXRED2Q8IWF2 684 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 GCSAMQ8N6F7 178 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 HORMAD2Q8N7B1 307 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CMASQ8NFW8 434 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 PTPMT1Q8WUK0 201 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 GFM1Q96RP9 751 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 SLC25A33Q9BSK2 321 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 NPFFR1Q9GZQ6 430 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KAT14Q9H8E8 782 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 HINT3Q9NQE9 182 aaKnown RBP1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KRT84Q9NSB2 600 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 OGFRQ9NZT2 677 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 DNAJB4Q9UDY4 337 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 BLOC1S6Q9UL45 172 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 KDRP35968 1356 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 IGLV5-52A0A0A0MRZ9 124 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 A0A1W2PP11 408 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 CTAGE9A4FU28 777 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM8BA6NDV4 472 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 A8MXE2 369 aa1.73□□□□□ -2.13
HIF1A-212ENST00000557538 F8VZ95 297 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms