RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 TMEM191CA6NGB0 347 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 PDE2AO00408 941 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 HGSO14964 777 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 INPP4BO15327 924 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 NKX2-8O15522 239 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 ATP1A3P13637 1013 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.161e-6■□□□□ 10.6
SLIRP-210ENST00000557431 RENBPP51606 427 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 RFTN1Q14699 578 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 ATP1A1-AS1Q5TC04 95 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 BORAQ6PGQ7 559 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 CACNA2D3Q8IZS8 1091 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 CBARPQ8N350 705 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 SLC37A2Q8TED4 501 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 LRRN4Q8WUT4 740 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 OR2M4Q96R27 311 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 ERGIC2Q96RQ1 377 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 HSD3B7Q9H2F3 369 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 ZWILCHQ9H900 591 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 APMAPQ9HDC9 416 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 ZNF71Q9NQZ8 489 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 LMBRD1Q9NUN5 540 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 PARVAQ9NVD7 372 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 CNOT8Q9UFF9 292 aaKnown RBP14.03□□□□□ -0.16
SLIRP-210ENST00000557431 KLHL3Q9UH77 587 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 SLC17A4Q9Y2C5 497 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 MED13Q9UHV7 2174 aa14.03□□□□□ -0.16
SLIRP-210ENST00000557431 LOC101059948A0A1B0GTJ6 334 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 LRRC53A6NM62 1247 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 MAFKO60675 156 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 SOCS5O75159 536 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 RNF8O76064 485 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 PGLSO95336 258 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 MAP3K6O95382 1288 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 CYP2A6P11509 494 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-210ENST00000557431 DESP17661 470 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 MAPK9P45984 424 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 KCNAB2Q13303 367 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 IHHQ14623 411 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 CT47A1Q5JQC4 288 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-210ENST00000557431 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 XKR5Q6UX68 686 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 TECPR1Q7Z6L1 1165 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 AGBL5Q8NDL9 886 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 OR4D9Q8NGE8 314 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF653Q96CK0 615 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 AP2M1Q96CW1 435 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 BTBD6Q96KE9 485 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 MGME1Q9BQP7 344 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 NT5MQ9NPB1 228 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 DONSONQ9NYP3 566 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 COL12A1Q99715 3063 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 RELNP78509 3460 aa14.02□□□□□ -0.17
SLIRP-210ENST00000557431 ASMTLO95671 621 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 IVLP07476 585 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 CDK11BP21127 795 aaKnown RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 NFATC2Q13469 925 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 NCAPHQ15003 741 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 PYCR3Q53H96 274 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 ARMC12Q5T9G4 340 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 TIPARPQ7Z3E1 657 aaKnown RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF571Q7Z3V5 609 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 ATPAF2Q8N5M1 289 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 BMPERQ8N8U9 685 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 PIH1D2Q8WWB5 315 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 CDH19Q9H159 772 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 HAUS4Q9H6D7 363 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 PCDHGA3Q9Y5H0 932 aa14.01□□□□□ -0.17
SLIRP-210ENST00000557431 MRPS18BQ9Y676 258 aaKnown RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 OAS3Q9Y6K5 1087 aaKnown RBP14.01□□□□□ -0.17
SLIRP-210ENST00000557431 SPTBP11277 2137 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 CCDC88CQ9P219 2028 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 H3BRJ5 948 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 DDX3XO00571 662 aaKnown RBP eCLIP14□□□□□ -0.173e-31■■■■■ 27.5
SLIRP-210ENST00000557431 FTLP02792 175 aaPredicted RBP14□□□□□ -0.17
SLIRP-210ENST00000557431 SFTPCP11686 197 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 SKILP12757 684 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 NR1D1P20393 614 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 OAS2P29728 719 aaKnown RBP14□□□□□ -0.17
SLIRP-210ENST00000557431 MMP13P45452 471 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 GPR3P46089 330 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 MYL5Q02045 173 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 ITKQ08881 620 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 MMRN1Q13201 1228 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 TRA2AQ13595 282 aaKnown RBP eCLIP14□□□□□ -0.17
SLIRP-210ENST00000557431 ASIC2Q16515 512 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 TMEM71Q6P5X7 295 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 TMCO3Q6UWJ1 677 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 POLNQ7Z5Q5 900 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 ANKRD20A12PQ8NF67 263 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 RTP4Q96DX8 246 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 SCRN2Q96FV2 425 aa14□□□□□ -0.17
SLIRP-210ENST00000557431 AHCYL2Q96HN2 611 aaKnown RBP14□□□□□ -0.17
SLIRP-210ENST00000557431 ZNF599Q96NL3 588 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms