RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 XIRP2A4UGR9 3374 aa19.24■□□□□ 0.67
FOXN3-214ENST00000557258 NPEPPSL1A6NEC2 478 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TXNDC9O14530 226 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 MTHFD2P13995 350 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 SOX11P35716 441 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 ZNF140P52738 457 aaPredicted RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 SETMARQ53H47 684 aaPredicted RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 ZRANB3Q5FWF4 1079 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 PIGGQ5H8A4 983 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 FATE1Q969F0 183 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TDRD1Q9BXT4 1180 aaKnown RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 EFCAB1Q9HAE3 211 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TRPM5Q9NZQ8 1165 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 STK39Q9UEW8 545 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TIMM22Q9Y584 194 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 DNAJC15Q9Y5T4 150 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 H0Y626 953 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TMCC1O94876 653 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 ALPIP09923 528 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 LINGO3P0C6S8 592 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 COL6A1P12109 1028 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 PRDX3P30048 256 aaKnown RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 HERVK_113P63132 956 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TRAF2Q12933 501 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TXNDC8Q6A555 127 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 CXorf57Q6NSI4 855 aaKnown RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 BBS5Q8N3I7 341 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 TTLL2Q9BWV7 592 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 ERVK-6Q9BXR3 956 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 YIPF3Q9GZM5 350 aa19.23■□□□□ 0.67
FOXN3-214ENST00000557258 COPS7BQ9H9Q2 264 aaPredicted RBP19.23■□□□□ 0.67
FOXN3-214ENST00000557258 CAPN8A6NHC0 703 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 E7ENX8 843 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PSMD12O00232 456 aaPredicted RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 FBP2O00757 339 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PRRG1O14668 218 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 KDELR3O43731 214 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 DNAJA2O60884 412 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 TBL1XO60907 577 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 SMIM24O75264 130 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 NDUFS3O75489 264 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 CDK14O94921 469 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 ALDOCP09972 364 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 LINC00032P0C843 101 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 MBL2P11226 248 aaPredicted RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 SMAD3P84022 425 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 RNF220Q5VTB9 566 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 IGSF21Q96ID5 467 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 LRCH3Q96II8 777 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 AARSD1Q9BTE6 412 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 MRPL9Q9BYD2 267 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 MEAF6Q9HAF1 191 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 VPS28Q9UK41 221 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 YIPF1Q9Y548 306 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PCDHB9Q9Y5E1 797 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 CD160O95971 181 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 MC4RP32245 332 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PEX19P40855 299 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 TUFMP49411 452 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 KPNA1P52294 538 aaPredicted RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 ACVR1Q04771 509 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PTK2BQ14289 1009 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 KIF19Q2TAC6 998 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 PAF1Q8N7H5 531 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 ARL14EPQ8N8R7 260 aaPredicted RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 C19orf60Q96EN9 201 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 GCNAQ96QF7 691 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 CCDC68Q9H2F9 335 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 GEMIN8Q9NWZ8 242 aaKnown RBP19.22■□□□□ 0.67
FOXN3-214ENST00000557258 RNF112Q9ULX5 631 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 ASB1Q9Y576 335 aa19.22■□□□□ 0.67
FOXN3-214ENST00000557258 BTN3A1O00481 513 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 PIP5K1BO14986 540 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 RNASEH1O60930 286 aaKnown RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 CLDN11O75508 207 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 EEF1DP29692 281 aaKnown RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 GRB7Q14451 532 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 ADGRF1Q5T601 910 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 TAS2R42Q7RTR8 314 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 SPATA24Q86W54 205 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 SLC22A9Q8IVM8 553 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 LPGAT1Q92604 370 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 CCDC126Q96EE4 140 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 HHIPL1Q96JK4 782 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 KLHL32Q96NJ5 620 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 MRPL1Q9BYD6 325 aaKnown RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 AKTIPQ9H8T0 292 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 TLR9Q9NR96 1032 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 MYO7AQ13402 2215 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 CLASP2O75122 1294 aaKnown RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 CRTAMO95727 393 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 ITGB6P18564 788 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 DNAJB1P25685 340 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 ALDH1A3P47895 512 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 YBX1P67809 324 aaKnown RBP19.21■□□□□ 0.67
FOXN3-214ENST00000557258 AAGABQ6PD74 315 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 CYP2R1Q6VVX0 501 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 PGAM4Q8N0Y7 254 aa19.21■□□□□ 0.67
FOXN3-214ENST00000557258 TUBGCP5Q96RT8 1024 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms