RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TPM2P07951 284 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ITIH2P19823 946 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SERPINA4P29622 427 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ZNF135P52742 658 aaPredicted RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 HYAL2Q12891 473 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 HLTFQ14527 1009 aaKnown RBP eCLIP8.69□□□□□ -1.02
VRK1-206ENST00000557222 RFTN1Q14699 578 aaPredicted RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 NR1D2Q14995 579 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 C14orf28Q4W4Y0 310 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 LRRC73Q5JTD7 316 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 MANEAQ5SRI9 462 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 CFAP58Q5T655 872 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 TMCO4Q5TGY1 634 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 AFMIDQ63HM1 303 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 PPP1R2P3Q6NXS1 205 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ATG14Q6ZNE5 492 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 RD3Q7Z3Z2 195 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SPRED1Q7Z699 444 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SRLQ86TD4 932 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 C17orf82Q86X59 251 aaPredicted RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 JAMLQ86YT9 394 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SLITRK4Q8IW52 837 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SLC30A5Q8TAD4 765 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ENOX1Q8TC92 643 aaKnown RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 KIAA1524Q8TCG1 905 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.69□□□□□ -1.02
VRK1-206ENST00000557222 MAGEB5Q9BZ81 275 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 KLC2Q9H0B6 622 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 CLSTN2Q9H4D0 955 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SYNDIG1Q9H7V2 258 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SAMSN1Q9NSI8 373 aaKnown RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 AKAP7Q9P0M2 348 aaPredicted RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 SIRPGQ9P1W8 387 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 IL17BQ9UHF5 180 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 TRIM33Q9UPN9 1127 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 COQ6Q9Y2Z9 468 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 SCN8AQ9UQD0 1980 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 NBASA2RRP1 2371 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 LRRK1Q38SD2 2015 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 TCRBV5S1A1TA0A578 114 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 DYRK3O43781 588 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 CREB3O43889 395 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 BUB1BO60566 1050 aaPredicted RBP8.68□□□□□ -1.02
VRK1-206ENST00000557222 RECQL5O94762 991 aaPredicted RBP8.68□□□□□ -1.02
VRK1-206ENST00000557222 PIGNO95427 931 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 CPNE6O95741 557 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 ITGB6P18564 788 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 NFKBIAP25963 317 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 TEAD1P28347 426 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 GPR3P46089 330 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 RENBPP51606 427 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 POLR2FP61218 127 aaKnown RBP8.68□□□□□ -1.02
VRK1-206ENST00000557222 B4GALNT1Q00973 533 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 SQSTM1Q13501 440 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
VRK1-206ENST00000557222 ARHGEF7Q14155 803 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 DPCR1Q3MIW9 517 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PNCKQ6P2M8 343 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 SCYL2Q6P3W7 929 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 LIPIQ6XZB0 460 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 DPPA4Q7L190 304 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 MON1BQ7L1V2 547 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 ZNF438Q7Z4V0 828 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 TAF8Q7Z7C8 310 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PIM3Q86V86 326 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PYROXD2Q8N2H3 581 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 FAM46DQ8NEK8 389 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 GPBAR1Q8TDU6 330 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 OR1E3Q8WZA6 343 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 FUBP1Q96AE4 644 aaKnown RBP8.68□□□□□ -1.02
VRK1-206ENST00000557222 PCDHB18PQ96TA0 734 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 DPYSL5Q9BPU6 564 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 FOXP3Q9BZS1 431 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 ADNPQ9H2P0 1102 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 LRIT1Q9P2V4 623 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PISDQ9UG56 409 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 OR1A2Q9Y585 309 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PCDHGA3Q9Y5H0 932 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 LRP4O75096 1905 aa8.68□□□□□ -1.02
VRK1-206ENST00000557222 PRAMEF33A0A0G2JMD5 474 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 TMEM202A6NGA9 273 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 J3KR12 359 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 TRAFD1O14545 582 aaPredicted RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 CASC3O15234 703 aaKnown RBP8.67□□□□□ -1.02
VRK1-206ENST00000557222 CCP110O43303 1012 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 SUV39H1O43463 412 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PRAMEF10O60809 474 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PALMO75781 387 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 PCCBP05166 539 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 ELFN1P0C7U0 828 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 CCDC172P0C7W6 258 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 TPI1P60174 286 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 AP1S1P61966 158 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 BCL2L1Q07817 233 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 RALGDSQ12967 914 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 NFATC3Q12968 1075 aa8.67□□□□□ -1.02
VRK1-206ENST00000557222 SYCP1Q15431 976 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms