RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 C16orf45Q96MC5 204 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-224ENST00000556737 AGAP2Q99490 1192 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 HERPUD2Q9BSE4 406 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 NRSN2Q9GZP1 204 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 LACRTQ9GZZ8 138 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 TMEM168Q9H0V1 697 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-224ENST00000556737 HAUS2Q9NVX0 235 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 SIRPGQ9P1W8 387 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 DNPEPQ9ULA0 475 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 RPL26L1Q9UNX3 145 aaKnown RBP10.3□□□□□ -0.76
SHMT2-224ENST00000556737 SLC17A4Q9Y2C5 497 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 GPSM3Q9Y4H4 160 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 ST14Q9Y5Y6 855 aa10.3□□□□□ -0.76
SHMT2-224ENST00000556737 RP1P56715 2156 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 BPTFQ12830 3046 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 NBEAQ8NFP9 2946 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 BTNL10A8MVZ5 291 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 TLX3O43711 291 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 KIF5CO60282 957 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 NOBOXO60393 691 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CST8O60676 142 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CSO75390 466 aaKnown RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CLDN7O95471 211 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 TNFP01375 233 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CTSEP14091 401 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 PTPN3P26045 913 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CD68P34810 354 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CTNNA1P35221 906 aaKnown RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 RPIAP49247 311 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 EPHB1P54762 984 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 WASHC5Q12768 1159 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 GALNT3Q14435 633 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 LLGL1Q15334 1064 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 TFDP3Q5H9I0 405 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 HENMT1Q5T8I9 393 aaKnown RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 DAAM2Q86T65 1068 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 TRIM74Q86UV6 250 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 GKN2Q86XP6 184 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 EXD1Q8NHP7 514 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 GLMNQ92990 594 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 NAT6Q93015 286 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CCDC74AQ96AQ1 378 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 HAUS1Q96CS2 278 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 AP2M1Q96CW1 435 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 EID2BQ96D98 161 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 SCARF2Q96GP6 870 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 AGAP3Q96P47 875 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 QKIQ96PU8 341 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 DEPDC7Q96QD5 511 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CCDC3Q9BQI4 270 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 MAK16Q9BXY0 300 aaKnown RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 SLC25A51Q9H1U9 297 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 CYP4F12Q9HCS2 524 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 SEPT10Q9P0V9 454 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 PADI4Q9UM07 663 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 GPR34Q9UPC5 381 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 PCYT1BQ9Y5K3 369 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 DUSP10Q9Y6W6 482 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 ZNF106Q9H2Y7 1883 aaKnown RBP10.29□□□□□ -0.76
SHMT2-224ENST00000556737 ADAMTS20P59510 1910 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 ZFYVE26Q68DK2 2539 aa10.29□□□□□ -0.76
SHMT2-224ENST00000556737 ACACAQ13085 2346 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 A0A0U1RQJ8 604 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA6CA6NDK9 693 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA6BA6NDN3 693 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 B4DGG1 531 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 ANKRD66B4E2M5 251 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 PDE2AO00408 941 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 NTN3O00634 580 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 PJA2O43164 708 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 BRINP1O60477 761 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 IVLP07476 585 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA6DP0CG33 693 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GPR1P46091 355 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 POLD2P49005 469 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 NR2C2P49116 596 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 TFDP2Q14188 446 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 PPP2R5EQ16537 467 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 TEX44Q53QW1 395 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 KAZNQ674X7 775 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 OGFOD3Q6PK18 319 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 BBS12Q6ZW61 710 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 LYSMD3Q7Z3D4 306 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 NLRP8Q86W28 1048 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 REXO1L1PQ8IX06 675 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 RAVER1Q8IY67 606 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 NDUFAF2Q8N183 169 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 LRRC57Q8N9N7 239 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 SPATA22Q8NHS9 363 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GPBAR1Q8TDU6 330 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 ZNF592Q92610 1267 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 COX14Q96I36 57 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 RBM41Q96IZ5 413 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 TEKT5Q96M29 485 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 RIOK2Q9BVS4 552 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 CARS2Q9HA77 564 aaKnown RBP10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GLOD4Q9HC38 313 aa10.28□□□□□ -0.76
SHMT2-224ENST00000556737 GOLGA6AQ9NYA3 693 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms