RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CPSF2Q9P2I0 782 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 SAE1Q9UBE0 346 aaPredicted RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 VPS28Q9UK41 221 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 FZD10Q9ULW2 581 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 ST3GAL5Q9UNP4 418 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 MSRB2Q9Y3D2 182 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 HBS1LQ9Y450 684 aaKnown RBP6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TTLL3Q9Y4R7 772 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 INSL6Q9Y581 213 aa6.17□□□□□ -1.42
CPSF2-205ENST00000556622 TEX51A0A1B0GUA7 166 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 MYOCOSA0A1B0GUC4 107 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SMIM31A0A1B0GVY4 71 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ARHGAP10A1A4S6 786 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CCDC189A1A4V9 331 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RGSL1A5PLK6 1076 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 OR14I1A6ND48 311 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 H0YJX3 145 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RNF103O00237 685 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PIRO00625 290 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 HGSO14964 777 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PFDN6O15212 129 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CCNT2O60583 730 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PLIN3O60664 434 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 GPR32O75388 356 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 DDHD2O94830 711 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 GJB5O95377 273 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 AP2A1O95782 977 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PENKP01210 267 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CALCAP01258 141 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ENO1P06733 434 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ITGA2BP08514 1039 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CD48P09326 243 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 FAM200BP0CF97 657 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SLC2A3P11169 496 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 TCF4P15884 667 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PRKCAP17252 672 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 IL4RP24394 825 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 HOXC12P31275 282 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RPL9P32969 192 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SLC26A3P40879 764 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SULT1E1P49888 294 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 TKTL1P51854 596 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 MRPS5P82675 430 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SATB1Q01826 763 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PPARDQ03181 441 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CDH17Q12864 832 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 OVGP1Q12889 678 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 STX5Q13190 355 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SLC12A1Q13621 1099 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 THOC5Q13769 683 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KIR3DS1Q14943 382 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 HERC3Q15034 1050 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ACCSLQ4AC99 568 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ANKRD20A4Q4UJ75 823 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 C9orf57Q5W0N0 161 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 GTF2IRD2BQ6EKJ0 949 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PMF1Q6P1K2 205 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 TMEM154Q6P9G4 183 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KIAA0408Q6ZU52 694 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ACOT1Q86TX2 421 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RTN4RL1Q86UN2 441 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 GTF2IRD2Q86UP8 949 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RASSF3Q86WH2 238 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ULK2Q8IYT8 1036 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PQLC3Q8N755 202 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RFWD2Q8NHY2 731 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 DDI1Q8WTU0 396 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ARNTL2Q8WYA1 636 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 NT5C3BQ969T7 300 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 FAM149B1Q96BN6 582 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PGBD4Q96DM1 585 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 VPS39Q96JC1 886 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 SNX27Q96L92 541 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CCDC140Q96MF4 163 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ZNF570Q96NI8 536 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 GUCD1Q96NT3 240 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ADAM2Q99965 735 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 FAM167BQ9BTA0 163 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 THTPAQ9BU02 230 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 TRMOQ9BU70 441 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 C11orf84Q9BUA3 381 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CCDC106Q9BWC9 280 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KLHL4Q9C0H6 718 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RETREG1Q9H6L5 497 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CATSPERBQ9H7T0 1116 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 EFCAB1Q9HAE3 211 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 ZDHHC7Q9NXF8 308 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 NCKIPSDQ9NZQ3 722 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 KLHL8Q9P2G9 620 aaPredicted RBP6.16□□□□□ -1.42
CPSF2-205ENST00000556622 COPG2Q9UBF2 871 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 CYTH4Q9UIA0 394 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 VANGL2Q9ULK5 521 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 PCDHB7Q9Y5E2 793 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 RPS6KL1Q9Y6S9 549 aa6.16□□□□□ -1.42
CPSF2-205ENST00000556622 A0A087X1B8 175 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 TCRBV7S3A2A0A539 114 aa6.15□□□□□ -1.42
CPSF2-205ENST00000556622 FAM170AA1A519 330 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms