RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 HS3ST3A1Q9Y663 406 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 CLIC4Q9Y696 253 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 U3KQA8 63 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 UBE4BO95155 1302 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 ITIH6Q6UXX5 1313 aa4.95□□□□□ -1.62
ATXN3-239ENST00000556315 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 MUC22E2RYF6 1773 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CEP192Q8TEP8 1941 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 C1QTNF3-AMACRE9PGA6 284 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ACOT7O00154 380 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 TPP1O14773 563 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 NVLO15381 856 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 NEBLO76041 1014 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 FKBP9O95302 570 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 HLA-DRAP01903 254 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CSF2P04141 144 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 C8BP07358 591 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ENO2P09104 434 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 BPIP17213 487 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CD58P19256 250 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 SLC6A4P31645 630 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 AKT2P31751 481 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 STAT5AP42229 794 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CCR10P46092 362 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 SGSHP51688 502 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 RPS24P62847 133 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CNTN1Q12860 1018 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 SLC12A1Q13621 1099 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CDH18Q13634 790 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 TGIF1Q15583 401 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 IGFBP7Q16270 282 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CR1LQ2VPA4 569 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 FAM133BQ5BKY9 247 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF542PQ5EBM4 170 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 MANEAQ5SRI9 462 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ARHGAP17Q68EM7 881 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 VASNQ6EMK4 673 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 Q6ZSR6 202 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 FKBP9P1Q75LS8 142 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ABI3BPQ7Z7G0 1075 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 HORMAD1Q86X24 394 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CARNMT1Q8N4J0 409 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CCDC150Q8NCX0 1101 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF564Q8TBZ8 553 aaPredicted RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 TMEM174Q8WUU8 243 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CHTF18Q8WVB6 975 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 OR8D1Q8WZ84 308 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 NDRG1Q92597 394 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 NAT6Q93015 286 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 FAXDC2Q96IV6 333 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 RPL10LQ96L21 214 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 PPP1R9BQ96SB3 815 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 IL12RB2Q99665 862 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 GORASP1Q9BQQ3 440 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CALN1Q9BXU9 219 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ULBP1Q9BZM6 244 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 IMPG2Q9BZV3 1241 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 ADNPQ9H2P0 1102 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 CUEDC2Q9H467 287 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 APOBEC3GQ9HC16 384 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 PREBQ9HCU5 417 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 PCDH12Q9NPG4 1184 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 DMAC2Q9NW81 257 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 OXSMQ9NWU1 459 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 DNAJC28Q9NX36 388 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 IPO11Q9UI26 975 aaKnown RBP4.94□□□□□ -1.62
ATXN3-239ENST00000556315 PAXBP1Q9Y5B6 917 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 SPO11Q9Y5K1 396 aa4.94□□□□□ -1.62
ATXN3-239ENST00000556315 PMS2P1A4D2B8 440 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 A6NNZ2 444 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 YJEFN3A6XGL0 299 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 E7ENQ6 273 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 XPO1O14980 1071 aaKnown RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 MCF2LO15068 1137 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ALOX15BO15296 676 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 AQP9O43315 295 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 MSI1O43347 362 aaKnown RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 LUC7L3O95232 432 aaKnown RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 PLATP00750 562 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 IGLV3-27P01718 113 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 LIPCP11150 499 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ANK1P16157 1881 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 PRLRP16471 622 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF18P17022 549 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 HNRNPA2B1P22626 353 aaKnown RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 RPL13P26373 211 aaKnown RBP4.93□□□□□ -1.62
ATXN3-239ENST00000556315 THBS2P35442 1172 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 UGT1A5P35504 534 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 CASRP41180 1078 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 TBX4P57082 545 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 NUCB2P80303 420 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SPIDRQ14159 915 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SLC39A14Q15043 492 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ZNF284Q2VY69 593 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 ACCSLQ4AC99 568 aa4.93□□□□□ -1.62
ATXN3-239ENST00000556315 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms