RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 MAP9Q49MG5 647 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CARD16Q5EG05 197 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 C22orf39Q6P5X5 142 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 SPOCD1Q6ZMY3 1216 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 VPS36Q86VN1 386 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 MRPL41Q8IXM3 137 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC13Q8IYE1 715 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 FAM186BQ8IYM0 893 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 NLGN4XQ8N0W4 816 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 SLC34A3Q8N130 599 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC112Q8NEF3 446 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 NLGN4YQ8NFZ3 816 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 PIWIL2Q8TC59 973 aaKnown RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 TFAP2BQ92481 460 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ART4Q93070 314 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 KIAA1143Q96AT1 154 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 FAM149B1Q96BN6 582 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 USP28Q96RU2 1077 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ASPSCR1Q9BZE9 553 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 SPRY4Q9C004 299 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 RDH14Q9HBH5 336 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 SLC39A1Q9NY26 324 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 KCTD3Q9Y597 815 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-236ENST00000556220 CSMD2Q7Z408 3487 aa6.91□□□□□ -1.3
ATXN3-236ENST00000556220 A0A0D9SEW6 157 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 B4E171 279 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 M0QYV0 167 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 POLR2DO15514 142 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TM7SF2O76062 418 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TNFP01375 233 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 RHOCP08134 193 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 PAEPP09466 180 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TCN2P20062 427 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 NR2F2P24468 414 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 HTR1BP28222 390 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 CCR1P32246 355 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 CSTF2P33240 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 PSMC2P35998 433 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TSPAN7P41732 249 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 NASPP49321 788 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 MXI1P50539 228 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 DNA2P51530 1060 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 COPB1P53618 953 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 LIMK2P53671 638 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 OR1D5P58170 312 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 SRP54P61011 504 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 YWHAEP62258 255 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 PITX1P78337 314 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 SLC20A2Q08357 652 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ABHD18Q0P651 414 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 STILQ15468 1287 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 C14orf28Q4W4Y0 310 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 DCAF12Q5T6F0 453 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ATP1A1-AS1Q5TC04 95 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 SLC6A19Q695T7 634 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 LINGO4Q6UY18 593 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 SFTPA2Q8IWL1 248 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 UNC5BQ8IZJ1 945 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 DCAF4L2Q8NA75 395 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TP53I13Q8NBR0 393 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 FAM46DQ8NEK8 389 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 STARD8Q92502 1023 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ARHGEF26Q96DR7 871 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ZSWIM1Q9BR11 485 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 NUDT22Q9BRQ3 303 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 TRIM62Q9BVG3 475 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 C1QTNF7Q9BXJ2 289 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 INTS2Q9H0H0 1204 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 UPF2Q9HAU5 1272 aaKnown RBP6.9□□□□□ -1.3
ATXN3-236ENST00000556220 POPDC2Q9HBU9 364 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 DKK3Q9UBP4 350 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 VANGL2Q9ULK5 521 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 MTMR6Q9Y217 621 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 ITM2BQ9Y287 266 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 HS3ST4Q9Y661 456 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 DGKBQ9Y6T7 804 aa6.9□□□□□ -1.3
ATXN3-236ENST00000556220 APCP25054 2843 aa6.9□□□□□ -1.31
ATXN3-236ENST00000556220 ABCA2Q9BZC7 2435 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CELSR1Q9NYQ6 3014 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 TCP11X1B4DZS4 312 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 AREL1O15033 823 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ZW10O43264 779 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 STX10O60499 249 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 LDLRP01130 860 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 PRF1P14222 555 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CD1CP29017 333 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ALDH4A1P30038 563 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ETV3P41162 512 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 ACADSBP45954 432 aa6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CCNHP51946 323 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 YWHAZP63104 245 aaKnown RBP6.89□□□□□ -1.31
ATXN3-236ENST00000556220 CDK17Q00537 523 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms