RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TCRBV7S3A2A0A539 114 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 GOLGA8CPA6NN73 597 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 C10orf142B7Z368 130 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 CACNB4O00305 520 aaPredicted RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 AURKAO14965 403 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 EIF3HO15372 352 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-214ENST00000556063 LDB2O43679 373 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 FOXD2O60548 495 aaPredicted RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 EPN2O95208 641 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 TTC4O95801 387 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 PCCBP05166 539 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 BPIP17213 487 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ITGALP20701 1170 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 MGAT1P26572 445 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 MAOBP27338 520 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 GRIA1P42261 906 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 RABIFP47224 123 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 THOP1P52888 689 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 PLTPP55058 493 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 C21orf59P57076 290 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 PRAMEP78395 509 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 CUL1Q13616 776 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ITGA9Q13797 1035 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 PTK2BQ14289 1009 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 FGL2Q14314 439 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 HLTFQ14527 1009 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-214ENST00000556063 PTPRRQ15256 657 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 IRF4Q15306 451 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 LPAL2Q16609 132 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 WSCD2Q2TBF2 565 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 BBS9Q3SYG4 887 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 TEX35Q5T0J7 233 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 CERCAMQ5T4B2 595 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ALS2CLQ60I27 953 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 RAET1GQ6H3X3 334 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ESRP1Q6NXG1 681 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 KYAT3Q6YP21 454 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 PTAR1Q7Z6K3 402 aaPredicted RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 CAND1Q86VP6 1230 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 ZCCHC9Q8N567 271 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 TRAM1L1Q8N609 369 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 GPR161Q8N6U8 529 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 TMEM145Q8NBT3 493 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 OR4K2Q8NGD2 314 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 GABPB2Q8TAK5 448 aaPredicted RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 UBXN4Q92575 508 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.61□□□□□ -1.19
TDP1-214ENST00000556063 CENPTQ96BT3 561 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 SLC6A18Q96N87 628 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 TTC1Q99614 292 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 MYOCQ99972 504 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 RIOK2Q9BVS4 552 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 SPATA16Q9BXB7 569 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ABCG8Q9H221 673 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 WDR26Q9H7D7 661 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 MRM3Q9HC36 420 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 EPB41L5Q9HCM4 733 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 TM9SF3Q9HD45 589 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 BPIFA1Q9NP55 256 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 PIH1D1Q9NWS0 290 aaKnown RBP7.61□□□□□ -1.19
TDP1-214ENST00000556063 PILRBQ9UKJ0 227 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 TCAF1Q9Y4C2 921 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 ARL5AQ9Y689 179 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 MAD1L1Q9Y6D9 718 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 SLC30A1Q9Y6M5 507 aa7.61□□□□□ -1.19
TDP1-214ENST00000556063 VCANP13611 3396 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 A0A0U1RQS6 177 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 FAM237BA0A1B0GVD1 139 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 MROH6A6NGR9 719 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 PROB1E7EW31 1015 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 H7C0S8 307 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 TLR4O00206 839 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 KHNYNO15037 678 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 VILLO15195 856 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 PFDN6O15212 129 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 RAD51BO15315 384 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 BUD23O43709 281 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 DFNA5O60443 496 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 LRP3O75074 770 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 CFIP05156 583 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 POLBP06746 335 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 SYPP08247 313 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 HOXC4P09017 264 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 RHOXF2BP0C7M4 288 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 THEGLP0DJG4 465 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 IGFALSP35858 605 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 PPARGP37231 505 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 MPLP40238 635 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 MAGEA3P43357 314 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 ZNF140P52738 457 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 MSLNQ13421 630 aaPredicted RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 INPP5AQ14642 412 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 GPR33Q49SQ1 333 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 CCDC38Q502W7 563 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 TSTD2Q5T7W7 516 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 HENMT1Q5T8I9 393 aaKnown RBP7.6□□□□□ -1.19
TDP1-214ENST00000556063 PNCKQ6P2M8 343 aa7.6□□□□□ -1.19
TDP1-214ENST00000556063 IL27RAQ6UWB1 636 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms