RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 FAF2Q96CS3 445 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 AP2M1Q96CW1 435 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 COX14Q96I36 57 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 SRPK1Q96SB4 655 aaKnown RBP7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 NUP85Q9BW27 656 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 XPO4Q9C0E2 1151 aaKnown RBP7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 CDH19Q9H159 772 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 ABCG8Q9H221 673 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 EPB41L5Q9HCM4 733 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 RBM22Q9NW64 420 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 VPS18Q9P253 973 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 MOSPD1Q9UJG1 213 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 SUFUQ9UMX1 484 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 LOXL2Q9Y4K0 774 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 COL27A1Q8IZC6 1860 aaPredicted RBP7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 KIF26BQ2KJY2 2108 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 LRRK1Q38SD2 2015 aa7.76□□□□□ -1.17
PTCSC3-201ENST00000556013 SSU72P8A0A1W2PR75 194 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 NPIPB15A6NHN6 443 aaPredicted RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ANKRD66B4E2M5 251 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 GPR89AB7ZAQ6 455 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 GOLGA6L19H0YKK7 550 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PROSCO94903 275 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ECEL1O95672 775 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PRLP01236 227 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PRB1P04280 392 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TPM3P06753 285 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PDHA1P08559 390 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 GPR89BP0CG08 455 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TCF4P15884 667 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PTMSP20962 102 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CD1CP29017 333 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 MAN1A1P33908 653 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CLCNKAP51800 687 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 STC1P52823 247 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 EPHB1P54762 984 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 MAXP61244 160 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CTBSQ01459 385 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 BIRC2Q13490 618 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 DPYSL3Q14195 570 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 SLC14A2Q15849 920 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PYCR3Q53H96 274 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 LRRC66Q68CR7 880 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 KCTD16Q68DU8 428 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 RAET1GQ6H3X3 334 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CAVIN1Q6NZI2 390 aaKnown RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TMEM71Q6P5X7 295 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 FOXR1Q6PIV2 292 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 USP53Q70EK8 1073 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 PELI3Q8N2H9 469 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 Q8N9G6 341 aaPredicted RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ZSCAN1Q8NBB4 408 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 KCTD6Q8NC69 237 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ARRDC2Q8TBH0 407 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ZNF564Q8TBZ8 553 aaPredicted RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 CCHCR1Q8TD31 782 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 HDAC11Q96DB2 347 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 SGF29Q96ES7 293 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TEFMQ96QE5 360 aaKnown RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TAAR9Q96RI9 348 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 TDRD1Q9BXT4 1180 aaKnown RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 ASPSCR1Q9BZE9 553 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 FOXP3Q9BZS1 431 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 BRD8Q9H0E9 1235 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 EPB41L1Q9H4G0 881 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 SYNDIG1Q9H7V2 258 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 NT5MQ9NPB1 228 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 RAD18Q9NS91 495 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 NENFQ9UMX5 172 aa7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 HELZ2Q9BYK8 2649 aaKnown RBP7.75□□□□□ -1.17
PTCSC3-201ENST00000556013 IGHV1OR21-1A0A087WYE8 117 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 IGHV5-10-1A0A0J9YXX1 117 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 TTC24A2A3L6 582 aaPredicted RBP7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 B4DGG1 531 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 B4E171 279 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 J3QKU1 62 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 CASC3O15234 703 aaKnown RBP7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 PPM1DO15297 605 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 SOD1P00441 154 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 SLC2A4P14672 509 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ZFXP17010 805 aaPredicted RBP7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 AK4P27144 223 aaPredicted RBP7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ALDH4A1P30038 563 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 TSPAN7P41732 249 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ACTR1BP42025 376 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ARHGAP25P42331 645 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 GNPDA1P46926 289 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 SPINT3P49223 89 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 OR1D5P58170 312 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 RAB15P59190 212 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ACTR1AP61163 376 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ITKQ08881 620 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 NFKBIBQ15653 356 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 SLC18A3Q16572 532 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ASTE1Q2TB18 679 aaPredicted RBP7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 ZSCAN23Q3MJ62 389 aa7.74□□□□□ -1.17
PTCSC3-201ENST00000556013 MANEAQ5SRI9 462 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms