RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 ASTE1Q2TB18 679 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 LRRC66Q68CR7 880 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 PCSK4Q6UW60 755 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 TSPAN33Q86UF1 283 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 SLITRK4Q8IW52 837 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 CMKLR1Q99788 373 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 TAAR2Q9P1P5 351 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 CTTNBP2NLQ9P2B4 639 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 ATXN7L1Q9ULK2 861 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
HNRNPC-221ENST00000555883 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 CPNE6O95741 557 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 TMEM253P0C7T8 217 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 JMJD7P0C870 316 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 CD82P27701 267 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 SLC5A2P31639 672 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 GPR1P46091 355 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 STC1P52823 247 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 EPHB1P54762 984 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 ARHGAP40Q5TG30 622 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 DENND2CQ68D51 928 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 PQLC3Q8N755 202 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 EXD1Q8NHP7 514 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 ARRDC2Q8TBH0 407 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 ZDHHC1Q8WTX9 485 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 TTC9Q92623 222 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 COX14Q96I36 57 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 DPYSL5Q9BPU6 564 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 FOXP3Q9BZS1 431 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 ABCG8Q9H221 673 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 RBM22Q9NW64 420 aaKnown RBP eCLIP12.65□□□□□ -0.384e-23■■■■■ 28.1
HNRNPC-221ENST00000555883 VPS18Q9P253 973 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 LOXL2Q9Y4K0 774 aa12.65□□□□□ -0.38
HNRNPC-221ENST00000555883 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 HGSO14964 777 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 CBFA2T2O43439 604 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 PRLP01236 227 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 LIPCP11150 499 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 CTPS1P17812 591 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ADCY8P40145 1251 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ARHGAP25P42331 645 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 GNPDA1P46926 289 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 FASLGP48023 281 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 CTBSQ01459 385 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 DSC2Q02487 901 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 PPIDQ08752 370 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ITKQ08881 620 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 TRA2AQ13595 282 aaKnown RBP eCLIP12.64□□□□□ -0.396e-8■■□□□ 12.5
HNRNPC-221ENST00000555883 IHHQ14623 411 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 CCDC81Q6ZN84 652 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 PIM3Q86V86 326 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 NAGSQ8N159 534 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 OR8K1Q8NGG5 319 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ZNF830Q96NB3 372 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 RNF157Q96PX1 679 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 OR2M4Q96R27 311 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 PCDH9Q9HC56 1237 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 DTLQ9NZJ0 730 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 AKAP7Q9P0M2 348 aaPredicted RBP12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
HNRNPC-221ENST00000555883 RHPN2P1A8MT19 583 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 B4GAT1O43505 415 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 MTA2O94776 668 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 ECEL1O95672 775 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 HLA-DQB2P05538 268 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 KDELR1P24390 212 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 TAS2R40P59535 323 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 GPLD1P80108 840 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 IFI35P80217 286 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 CFHR1Q03591 330 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 GBE1Q04446 702 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 PTPRRQ15256 657 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 SLC14A2Q15849 920 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 PYCR3Q53H96 274 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 LRRC38Q5VT99 294 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 XKR5Q6UX68 686 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 SFTPA2Q8IWL1 248 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 RHOT2Q8IXI1 618 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 CCDC13Q8IYE1 715 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 ZNF843Q8N446 348 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 ADGRE3Q9BY15 652 aa12.63□□□□□ -0.39
HNRNPC-221ENST00000555883 RMI1Q9H9A7 625 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms