RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 WDR24Q96S15 920 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 FAM118BQ9BPY3 351 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 RIOK2Q9BVS4 552 aaKnown RBP20.44■□□□□ 0.86
VTI1B-205ENST00000555543 TMEM168Q9H0V1 697 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 EFR3BQ9Y2G0 817 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 ADGRG1Q9Y653 693 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 HACD1B0YJ81 288 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 MTSS1O43312 755 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 PMPCBO75439 489 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 CEACAM5P06731 702 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 RBL1P28749 1068 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 DUSP3P51452 185 aaPredicted RBP20.43■□□□□ 0.86
VTI1B-205ENST00000555543 GSDMDP57764 484 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 NR0B2Q15466 257 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 CCDC181Q5TID7 509 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 KDELC1Q6UW63 502 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 ADAMTSL4Q6UY14 1074 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 TXLNBQ8N3L3 684 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 KYQ8NBH2 561 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 CCL4L1Q8NHW4 92 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 OXNAD1Q96HP4 312 aaPredicted RBP20.43■□□□□ 0.86
VTI1B-205ENST00000555543 SUDS3Q9H7L9 328 aaPredicted RBP20.43■□□□□ 0.86
VTI1B-205ENST00000555543 SIRPGQ9P1W8 387 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 KLHL8Q9P2G9 620 aaPredicted RBP20.43■□□□□ 0.86
VTI1B-205ENST00000555543 MOSPD1Q9UJG1 213 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 AMFRQ9UKV5 643 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 DOLKQ9UPQ8 538 aa20.43■□□□□ 0.86
VTI1B-205ENST00000555543 ASXL3Q9C0F0 2248 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 CACNA1BQ00975 2339 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 CPED1A4D0V7 1026 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 EME2A4GXA9 379 aaPredicted RBP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 TMEM8BA6NDV4 472 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 H7C0C1 242 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 PDE2AO00408 941 aaPredicted RBP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 DDX3YO15523 660 aaKnown RBP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 OPA1O60313 960 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 GP1BAP07359 652 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 JUPP14923 745 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 ATP5OP48047 213 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 POLD2P49005 469 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 SPINT3P49223 89 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 TARDBPQ13148 414 aaKnown RBP eCLIP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 XRCC4Q13426 336 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 PERM1Q5SV97 790 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 DOK6Q6PKX4 331 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 LVRNQ6Q4G3 990 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 EFL1Q7Z2Z2 1120 aaKnown RBP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 GKN2Q86XP6 184 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 SFTPA2Q8IWL1 248 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 NRSN1Q8IZ57 195 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 SYCE1Q8N0S2 351 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 CARS2Q9HA77 564 aaKnown RBP20.42■□□□□ 0.86
VTI1B-205ENST00000555543 NCKIPSDQ9NZQ3 722 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 ZMIZ1Q9ULJ6 1067 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 GPR34Q9UPC5 381 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 SHOC2Q9UQ13 582 aa20.42■□□□□ 0.86
VTI1B-205ENST00000555543 COL27A1Q8IZC6 1860 aaPredicted RBP20.41■□□□□ 0.86
VTI1B-205ENST00000555543 CASC3O15234 703 aaKnown RBP20.41■□□□□ 0.86
VTI1B-205ENST00000555543 NDST3O95803 873 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 SLC4A1P02730 911 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 WNT3AP56704 352 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 E2F1Q01094 437 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 HENMT1Q5T8I9 393 aaKnown RBP20.41■□□□□ 0.86
VTI1B-205ENST00000555543 PID1Q7Z2X4 250 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 NLRP8Q86W28 1048 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 SDR16C5Q8N3Y7 309 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 ARL10Q8N8L6 244 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 DCBLD1Q8N8Z6 715 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 MDM1Q8TC05 714 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 VAT1Q99536 393 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 GORASP1Q9BQQ3 440 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 EVA1BQ9NVM1 165 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 GULP1Q9UBP9 304 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 FAM153AQ9UHL3 310 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 SUFUQ9UMX1 484 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 SLC17A4Q9Y2C5 497 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 ZNF711Q9Y462 761 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 SPO11Q9Y5K1 396 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 ANKRD11Q6UB99 2663 aaPredicted RBP20.41■□□□□ 0.86
VTI1B-205ENST00000555543 MYLKQ15746 1914 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 KNTC1P50748 2209 aa20.41■□□□□ 0.86
VTI1B-205ENST00000555543 TRABD2BA6NFA1 517 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 FADS2P1A8MWK0 482 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 MIF4GDA9UHW6 222 aaKnown RBP20.4■□□□□ 0.86
VTI1B-205ENST00000555543 INPP4BO15327 924 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 MT-CO3P00414 261 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 GNPDA1P46926 289 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 EIF3EP60228 445 aaKnown RBP20.4■□□□□ 0.86
VTI1B-205ENST00000555543 CDCP2Q5VXM1 449 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 TAF8Q7Z7C8 310 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 RAVER1Q8IY67 606 aaKnown RBP20.4■□□□□ 0.86
VTI1B-205ENST00000555543 UBL4BQ8N7F7 174 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 SCG3Q8WXD2 468 aaKnown RBP20.4■□□□□ 0.86
VTI1B-205ENST00000555543 GLMNQ92990 594 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 COX14Q96I36 57 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 MRGPRX2Q96LB1 330 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 FCRL5Q96RD9 977 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 ZFYVE1Q9HBF4 777 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 MAGEE1Q9HCI5 957 aa20.4■□□□□ 0.86
VTI1B-205ENST00000555543 PKD2L2Q9NZM6 624 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms