RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 LARP4Q71RC2 724 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■■□□ 19.2
PPP4R3A-208ENST00000555462 LINC00523Q86TU6 105 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 CAMK1DQ8IU85 385 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 AFAP1L2Q8N4X5 818 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC15A4Q8N697 577 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 CDYL2Q8N8U2 506 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 KCTD14Q9BQ13 255 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 POLE4Q9NR33 117 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 TBC1D13Q9NVG8 400 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 INVSQ9Y283 1065 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 ASB1Q9Y576 335 aa17.03■□□□□ 0.32
PPP4R3A-208ENST00000555462 FZD9O00144 591 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 GPX3P22352 226 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 GSK3BP49841 420 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 OR4D2P58180 307 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 CFAP52Q8N1V2 620 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SMYD1Q8NB12 490 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 PCYOX1LQ8NBM8 494 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 C2CD4AQ8NCU7 369 aaPredicted RBP17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SDCCAG3Q96C92 435 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 LRRC58Q96CX6 371 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 MAELQ96JY0 434 aaKnown RBP17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SLC38A7Q9NVC3 462 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 PARP14Q460N5 1801 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 ASB14A6NK59 587 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 IQCF5A8MTL0 148 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 CDC7O00311 574 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 AXIN1O15169 862 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 TOMM70O94826 608 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 FUCA1P04066 466 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 TCF3P15923 654 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SEMA3AQ14563 771 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 NR1D2Q14995 579 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 TSNQ15631 228 aaKnown RBP17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 ALFQ53S48 1182 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 FAM86B1Q8N7N1 296 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 MEAF6Q9HAF1 191 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SACM1LQ9NTJ5 587 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 SIP14410 1827 aa17.02■□□□□ 0.32
PPP4R3A-208ENST00000555462 ANXA9O76027 345 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 PAMP19021 973 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 RBBP7Q16576 425 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 DDR2Q16832 855 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 ZNF678Q5SXM1 525 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 PPP4R4Q6NUP7 873 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 ALKAL1Q6UXT8 129 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 OR13J1Q8NGT2 312 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 HMCESQ96FZ2 354 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 ANKRD60Q9BZ19 345 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 ALG2Q9H553 416 aa17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.31
PPP4R3A-208ENST00000555462 A0A0G2JLL6 359 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 ZNF487B1APH4 448 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 FXYD1O00168 92 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 NPHS1O60500 1241 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 SELPLGQ14242 412 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 MAPRE2Q15555 327 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 UBXN11Q5T124 520 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 EGFLAMQ63HQ2 1017 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 PRRT2Q7Z6L0 340 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 FIG4Q92562 907 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 BHMTQ93088 406 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 PLGRKTQ9HBL7 147 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 PLK2Q9NYY3 685 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 IFT80Q9P2H3 777 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 GTF2IRD1Q9UHL9 959 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 POLG2Q9UHN1 485 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 CLASP2O75122 1294 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 ZNF189O75820 626 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 SHMT2P34897 504 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 DGCR6Q14129 220 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 INPP5AQ14642 412 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 HERC3Q15034 1050 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 CLHC1Q8NHS4 586 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 PLEKHA8Q96JA3 519 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 NMUR1Q9HB89 426 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 VPS28Q9UK41 221 aa17.01■□□□□ 0.31
PPP4R3A-208ENST00000555462 AZIN1O14977 448 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 STAU1O95793 577 aaKnown RBP17■□□□□ 0.31
PPP4R3A-208ENST00000555462 CYP4B1P13584 511 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 SERPINH1P50454 418 aaKnown RBP17■□□□□ 0.31
PPP4R3A-208ENST00000555462 PFKPQ01813 784 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 POU4F1Q01851 419 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 CREB5Q02930 508 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 PAQR3Q6TCH7 311 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 TANKQ92844 425 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 CHID1Q9BWS9 393 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 TBC1D23Q9NUY8 699 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 ZMYM5Q9UJ78 669 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 VPS4AQ9UN37 437 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 NCAM2O15394 837 aa17■□□□□ 0.31
PPP4R3A-208ENST00000555462 SYNCRIPO60506 623 aaKnown RBP17■□□□□ 0.31
PPP4R3A-208ENST00000555462 SH3BGRP55822 239 aaPredicted RBP17■□□□□ 0.31
PPP4R3A-208ENST00000555462 RFTN1Q14699 578 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms