RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 HLA-DPA1P20036 260 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 MSNP26038 577 aaKnown RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 PSMB4P28070 264 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 ACTN2P35609 894 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 SPINT3P49223 89 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 RPIAP49247 311 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CDK3Q00526 305 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 KLF1Q13351 362 aaPredicted RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 C1orf61Q13536 156 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 TCEA2Q15560 299 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 DEFB133Q30KQ1 61 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 ZCCHC8Q6NZY4 707 aaKnown RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 DOK6Q6PKX4 331 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 KDELC1Q6UW63 502 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 ADAMTSL4Q6UY14 1074 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CBARPQ8N350 705 aaPredicted RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 SLC25A41Q8N5S1 370 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 FAM71DQ8N9W8 422 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CCDC110Q8TBZ0 833 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 SCAMP4Q969E2 229 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 TADA1Q96BN2 335 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 PDXPQ96GD0 296 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 OXNAD1Q96HP4 312 aaPredicted RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 FICDQ9BVA6 458 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 RIOK2Q9BVS4 552 aaKnown RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 TEX101Q9BY14 249 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CDH19Q9H159 772 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 ABCG8Q9H221 673 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 TCEAL2Q9H3H9 227 aaPredicted RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 FAM83DQ9H4H8 585 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 SUDS3Q9H7L9 328 aaPredicted RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 USP29Q9HBJ7 922 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 CYP4F12Q9HCS2 524 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 HACD3Q9P035 362 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
SRP54-206ENST00000555317 DGKBQ9Y6T7 804 aa12.06□□□□□ -0.48
SRP54-206ENST00000555317 PRSS38A1L453 326 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 TMEM202A6NGA9 273 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 TPP1O14773 563 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 HYAL3O43820 417 aaPredicted RBP12.05□□□□□ -0.48
SRP54-206ENST00000555317 ILKQ13418 452 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SLC1A5Q15758 541 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 P3H1Q32P28 736 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SIRPB2Q5JXA9 342 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 ALS2CLQ60I27 953 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 GLT6D1Q7Z4J2 308 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 TAF8Q7Z7C8 310 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SLCO6A1Q86UG4 719 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 NLRP8Q86W28 1048 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SLC13A5Q86YT5 568 aaPredicted RBP12.05□□□□□ -0.48
SRP54-206ENST00000555317 PELI3Q8N2H9 469 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SDR16C5Q8N3Y7 309 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 CHCHD4Q8N4Q1 142 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 BLOC1S5Q8TDH9 187 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 MAIP1Q8WWC4 291 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 ADAMTS14Q8WXS8 1223 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 HIC2Q96JB3 615 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 MRGPRX2Q96LB1 330 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 ZSCAN5AQ9BUG6 496 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 LGR4Q9BXB1 951 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 SPATA16Q9BXB7 569 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 CARS2Q9HA77 564 aaKnown RBP12.05□□□□□ -0.48
SRP54-206ENST00000555317 FGF22Q9HCT0 170 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 ZNF148Q9UQR1 794 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 PCDHGA1Q9Y5H4 931 aa12.05□□□□□ -0.48
SRP54-206ENST00000555317 IGF2RP11717 2491 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 LOC285095A0A1B0GVY8 99 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 INPP4BO15327 924 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 GCATO75600 419 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ASMTLO95671 621 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 CKMT1AP12532 417 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 GNPDA1P46926 289 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ACADVLP49748 655 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 SHC2P98077 582 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ILF3Q12906 894 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRP54-206ENST00000555317 PEX6Q13608 980 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 NR0B2Q15466 257 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ZDHHC20Q5W0Z9 365 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 LVRNQ6Q4G3 990 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 RFLNAQ6ZTI6 216 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 RAB44Q7Z6P3 723 aaPredicted RBP12.04□□□□□ -0.48
SRP54-206ENST00000555317 CCDC89Q8N998 374 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 FAM181AQ8N9Y4 354 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 ATG4AQ8WYN0 398 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 OR1E3Q8WZA6 343 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 APOLD1Q96LR9 279 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 TBL1YQ9BQ87 522 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 TMEM121Q9BTD3 319 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 SCNM1Q9BWG6 230 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
SRP54-206ENST00000555317 TOR4AQ9NXH8 423 aa12.04□□□□□ -0.48
SRP54-206ENST00000555317 PNMA8BQ9ULN7 279 aaPredicted RBP12.04□□□□□ -0.48
SRP54-206ENST00000555317 GPR34Q9UPC5 381 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms